Detection of genomic rearrangements in cucumber using genomecmp software

Maciej Kulawik; Magdalena Ewa Pawełkowicz; Michał Wojcieszek; Wojciech Pląder; Robert M. Nowak

doi:10.1117/12.2280631

7 August 2017 Detection of genomic rearrangements in cucumber using genomecmp software

Maciej Kulawik, Magdalena Ewa Pawełkowicz, Michał Wojcieszek, Wojciech Pląder, Robert M. Nowak

Proceedings Volume 10445, Photonics Applications in Astronomy, Communications, Industry, and High Energy Physics Experiments 2017; 1044535 (2017) https://doi.org/10.1117/12.2280631
Event: Photonics Applications in Astronomy, Communications, Industry, and High-Energy Physics Experiments 2017, 2017, Wilga, Poland

Abstract

Comparative genomic by increasing information about the genomes sequences available in the databases is a rapidly evolving science. A simple comparison of the general features of genomes such as genome size, number of genes, and chromosome number presents an entry point into comparative genomic analysis. Here we present the utility of the new tool genomecmp for finding rearrangements across the compared sequences and applications in plant comparative genomics.

Citation Download Citation

Maciej Kulawik, Magdalena Ewa Pawełkowicz, Michał Wojcieszek, Wojciech Pląder, and Robert M. Nowak "Detection of genomic rearrangements in cucumber using genomecmp software", Proc. SPIE 10445, Photonics Applications in Astronomy, Communications, Industry, and High Energy Physics Experiments 2017, 1044535 (7 August 2017); https://doi.org/10.1117/12.2280631

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