Investigation of structural and statistical characteristics of interfering GB-speckles, coding the nucleotide sequences of the gene GPCR of Lumpy Skin Disease Virus

O. V. Ulianova; Yu. V. Saltykov; S. S. Zaytsev; I. A. Subbotina; N. N. Filonova; A. M. Lyapina; S. S. Ulyanov; V. A. Feodorova

doi:10.1117/12.2522980

3 June 2019 Investigation of structural and statistical characteristics of interfering GB-speckles, coding the nucleotide sequences of the gene GPCR of Lumpy Skin Disease Virus

O. V. Ulianova, Yu. V. Saltykov, S. S. Zaytsev, I. A. Subbotina, N. N. Filonova, A. M. Lyapina, S. S. Ulyanov, V. A. Feodorova

Author Affiliations +

Proceedings Volume 11065, Saratov Fall Meeting 2018: Optical and Nano-Technologies for Biology and Medicine; 110650K (2019) https://doi.org/10.1117/12.2522980
Event: International Symposium on Optics and Biophotonics VI: Saratov Fall Meeting 2018, 2018, Saratov, Russian Federation

Abstract

Analysis of structural properties of the interfering GB-speckles, generated for nucleotide sequences of Lumpy Skin Disease Virus (LSDV), has been carried out. It has been shown, that at the interference of two LSDV GB-specklepatterns, three types of interference pictures are forming: quasi-random speckle structure without interference fringes, fringes, modulated by speckles, or having bends and pure regular fringes without visible speckle-modulation. It has been found, that width of fringes and their orientation depend on position of SNP in comparing nucleotide sequences. It has been demonstrated that implication of interference of two GB-speckles, generated on the target virus nucleotide sequences, can be considered as a new direction in modern bioinformatics.

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O. V. Ulianova, Yu. V. Saltykov, S. S. Zaytsev, I. A. Subbotina, N. N. Filonova, A. M. Lyapina, S. S. Ulyanov, and V. A. Feodorova "Investigation of structural and statistical characteristics of interfering GB-speckles, coding the nucleotide sequences of the gene GPCR of Lumpy Skin Disease Virus", Proc. SPIE 11065, Saratov Fall Meeting 2018: Optical and Nano-Technologies for Biology and Medicine, 110650K (3 June 2019); https://doi.org/10.1117/12.2522980

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