Multiple protein sequence comparison by genetic algorithms

Raquel Roche Gonzalez; Carmen Morato Izquierdo; Juan Seijas

doi:10.1117/12.304857

25 March 1998 Multiple protein sequence comparison by genetic algorithms

Raquel Roche Gonzalez; Carmen Morato Izquierdo; Juan Seijas

Author Affiliations +

Proceedings Volume 3390, Applications and Science of Computational Intelligence; (1998) https://doi.org/10.1117/12.304857
Event: Aerospace/Defense Sensing and Controls, 1998, Orlando, FL, United States

Abstract

In the analysis of molecular evolution, it is very frequent to consider M sequences at a time, where M greater than 2. The simultaneous study of the relationships among M sequences is a large and difficult problem. This paper presents a new approach to multiple protein sequence comparison based on Genetic Algorithms, (G.A.). In particular, it is described an algorithm for finding the alignment of three protein sequences; besides, it can be easily changed for finding the alignment of more than three sequences or for other types of sequences. The G.A. was originally developed for only two sequences comparison [Morato96].

Citation Download Citation

Raquel Roche Gonzalez, Raquel Roche Gonzalez, Carmen Morato Izquierdo, Carmen Morato Izquierdo, Juan Seijas, Juan Seijas, } "Multiple protein sequence comparison by genetic algorithms", Proc. SPIE 3390, Applications and Science of Computational Intelligence, (25 March 1998); doi: 10.1117/12.304857; https://doi.org/10.1117/12.304857

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