23 February 2005 Comparison of two approaches to oligo sets optimization
Author Affiliations +
DNA computing provides new molecular mechanism for storing and processing information. DNA macrostructures are bases of specially designed algorithms realized by so called soft hardware applications. To obtain these structures a special DNA sequences design tool is required. In this paper comparison of two such computer programs was provided. In our program a custom genetic algorithm with new hybrid operators was involved in creating a set of DNA chains. The second program written by Winfree makes random changes using a given set of short constant forbidden fragments.
© (2005) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE). Downloading of the abstract is permitted for personal use only.
Grzegorz Tomczuk, Piotr Wasiewicz, "Comparison of two approaches to oligo sets optimization", Proc. SPIE 5775, Photonics Applications in Astronomy, Communications, Industry, and High-Energy Physics Experiments III, (23 February 2005); doi: 10.1117/12.610790; https://doi.org/10.1117/12.610790

Back to Top