26 March 2012 Autofocus evaluation for brightfield microscopy pathology
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Abstract
An essential and indispensable component of automated microscopy framework is the automatic focusing system, which determines the in-focus position of a given field of view by searching the maximum value of a focusing function over a range of z-axis positions. The focus function and its computation time are crucial to the accuracy and efficiency of the system. Sixteen focusing algorithms were analyzed for histological and histopathological images. In terms of accuracy, results have shown an overall high performance by most of the methods. However, we included in the evaluation study other criteria such as computational cost and focusing curve shape which are crucial for real-time applications and were used to highlight the best practices.
© 2012 Society of Photo-Optical Instrumentation Engineers (SPIE)
Rafael Redondo, Rafael Redondo, Gabriel Cristóbal, Gabriel Cristóbal, Gloria Bueno Garcia, Gloria Bueno Garcia, Oscar Deniz, Oscar Deniz, Jesus Salido, Jesus Salido, Maria del Milagro Fernandez, Maria del Milagro Fernandez, Juan Vidal, Juan Vidal, Juan Carlos Valdiviezo, Juan Carlos Valdiviezo, Rodrigo Nava, Rodrigo Nava, Boris Escalante-Ramírez, Boris Escalante-Ramírez, Marcial Garcia-Rojo, Marcial Garcia-Rojo, } "Autofocus evaluation for brightfield microscopy pathology," Journal of Biomedical Optics 17(3), 036008 (26 March 2012). https://doi.org/10.1117/1.JBO.17.3.036008 . Submission:
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