journal of biomedical optics
VOL. 11 · NO. 6 | November 2006
CONTENTS
IN THIS ISSUE

Errata (3)
JBO Letters
Matthew Schulmerich, Kathryn Dooley, Michael Morris, Thomas Vanasse, Steven Goldstein
J. Biomed. Opt. 11(6), 060502 (1 November 2006) https://doi.org/10.1117/1.2400233
TOPICS: Bone, Raman spectroscopy, Tissues, Skin, Fiber optics, Dual energy x-ray absorptiometry, Minerals, Natural surfaces, Optical clearing, Raman scattering
J. Biomed. Opt. 11(6), 060504 (1 November 2006) https://doi.org/10.1117/1.2400248
TOPICS: Tissues, Visualization, Biological research, Teeth, Tissue optics, Statistical analysis, Polarization, Image processing, Image enhancement, Matrices
Review Papers
J. Biomed. Opt. 11(6), 063001 (1 November 2006) https://doi.org/10.1117/1.2400214
TOPICS: Optical coherence tomography, Endoscopy, Endoscopes, Tissues, Imaging systems, Biopsy, Tissue optics, Mirrors, In vivo imaging, GRIN lenses
Research Papers
J. Biomed. Opt. 11(6), 064001 (1 November 2006) https://doi.org/10.1117/1.2397574
TOPICS: Cartilage, Polarization, Collagen, Optical coherence tomography, Natural surfaces, Tissue optics, Birefringence, Tissues, Optical fibers, Modulators
Michael Cobb, Yuchuan Chen, Robert Underwood, Marcia Usui, John Olerud, Xingde Li
J. Biomed. Opt. 11(6), 064002 (1 November 2006) https://doi.org/10.1117/1.2388152
TOPICS: Optical coherence tomography, Wound healing, Tissues, Image segmentation, Natural surfaces, Skin, Collagen, In vivo imaging, Tissue optics, Backscatter
J. Biomed. Opt. 11(6), 064003 (1 November 2006) https://doi.org/10.1117/1.2399454
TOPICS: Endoscopes, Optical coherence tomography, Colon, In vivo imaging, Tissues, Mirrors, Endoscopy, GRIN lenses, Imaging systems, Reflection
J. Biomed. Opt. 11(6), 064004 (1 November 2006) https://doi.org/10.1117/1.2397576
TOPICS: Microorganisms, Digital holography, 3D image processing, Holograms, Biological research, Statistical analysis, Image segmentation, Matrices, Three dimensional sensing, 3D image reconstruction
Alexa Teichmann, Marc Pissavini, Louis Ferrero, Adeline Dehais, Leonhard Zastrow, Heike Richter, Jürgen Lademann
J. Biomed. Opt. 11(6), 064005 (1 November 2006) https://doi.org/10.1117/1.2409291
TOPICS: Skin, In vivo imaging, Fourier transforms, Laser scanners, Sun, Microscopy, Ultraviolet radiation, Colorimetry, Confocal microscopy, Optical filters
Ming-Gu Lin, Tsung-Lin Yang, Cheng-Tien Chiang, Hsien-Ching Kao, Jin-Ning Lee, Wen Lo, Shiou-Hwa Jee, Yang-Fang Chen, Chen-Yuan Dong, Sung-Jan Lin
J. Biomed. Opt. 11(6), 064006 (1 November 2006) https://doi.org/10.1117/1.2405347
TOPICS: Second-harmonic generation, Collagen, Atrial fibrillation, Optical fibers, Skin, Multiphoton microscopy, Microscopy, Injuries, Physics, Dermatology
Matthew Bartek, Xin Wang, Wendy Wells, Keith Paulsen, Brian Pogue
J. Biomed. Opt. 11(6), 064007 (1 November 2006) https://doi.org/10.1117/1.2398903
TOPICS: Particles, Tissues, Scattering, Mie scattering, Tissue optics, Breast, Light scattering, Optical spheres, Biological research, Electron microscopy
Kenneth Fan, Paul Bell, Daniel Fried
J. Biomed. Opt. 11(6), 064008 (1 November 2006) https://doi.org/10.1117/1.2401151
TOPICS: Gas lasers, Laser ablation, Pulsed laser operation, Bone, Carbon monoxide, Tissues, Teeth, Absorption, Laser dentistry, Plasma
Vitaly Erukhimovitch, Marina Talyshinsky, Yelena Souprun, Mahmoud Huleihel
J. Biomed. Opt. 11(6), 064009 (1 November 2006) https://doi.org/10.1117/1.2397554
TOPICS: FT-IR spectroscopy, Leukemia, Microscopy, Spectroscopy, Diagnostics, Imaging spectroscopy, Spectroscopes, Cancer, Signal to noise ratio, Statistical analysis
Jess Snedeker, G. Pelled, Y. Ziberman, F. Gerhard, Ralph Müller, D. Gazit
J. Biomed. Opt. 11(6), 064010 (1 November 2006) https://doi.org/10.1117/1.2393153
TOPICS: Tissues, In vivo imaging, Endoscopy, Microscopy, Detection and tracking algorithms, Tissue optics, Confocal microscopy, Luminescence, Elastography, Video
J. Biomed. Opt. 11(6), 064011 (1 November 2006) https://doi.org/10.1117/1.2402110
TOPICS: Microscopes, Confocal microscopy, Luminescence, Point spread functions, Sensors, Objectives, Optical transfer functions, Signal detection, Imaging systems, Beam splitters
Jonathan Levitt, Amy Baldwin, Antonios Papadakis, Sameer Puri, Joanna Xylas, Karl Münger, Irene Georgakoudi
J. Biomed. Opt. 11(6), 064012 (1 November 2006) https://doi.org/10.1117/1.2401149
TOPICS: Luminescence, Cell death, In vivo imaging, Light scattering, Tissues, Spectroscopy, Cancer, Fluorescence spectroscopy, Imaging spectroscopy, Biomedical engineering
J. Biomed. Opt. 11(6), 064013 (1 November 2006) https://doi.org/10.1117/1.2372457
TOPICS: Luminescence, Microscopy, Image resolution, Point spread functions, Objectives, Nanostructures, Glasses, Mirrors, Image enhancement, Medicine
Marcus-Rene Lisy, Elisabeth Schuler, Frank Lehmann, Peter Czerney, Werner Kaiser, Ingrid Hilger
J. Biomed. Opt. 11(6), 064014 (1 November 2006) https://doi.org/10.1117/1.2409310
TOPICS: Luminescence, In vivo imaging, Control systems, Imaging systems, Optical imaging, In vitro testing, Signal detection, Diagnostics, Kidney, Statistical analysis
Ilkka Nissilä, Jeremy Hebden, David Jennions, Jenni Heino, Martin Schweiger, Kalle Kotilahti, Tommi Noponen, Adam Gibson, S. Jaervenpaeae, Lauri Lipiäinen, Toivo Katila
J. Biomed. Opt. 11(6), 064015 (1 November 2006) https://doi.org/10.1117/1.2400700
TOPICS: Data modeling, Sensors, Imaging systems, Time metrology, Finite element methods, Optical fibers, Optical properties, Optical tomography, Tissue optics, Image quality
Stefan Carp, Tina Kauffman, Qianqian Fang, Elizabeth Rafferty, Richard Moore, Daniel Kopans, David Boas
J. Biomed. Opt. 11(6), 064016 (1 November 2006) https://doi.org/10.1117/1.2397572
TOPICS: Breast, Tissues, Oxygen, Blood, Tissue optics, Blood circulation, Optical fibers, Scattering, Positron emission tomography, Spectroscopy
J. Biomed. Opt. 11(6), 064017 (1 November 2006) https://doi.org/10.1117/1.2400702
TOPICS: Optical properties, In vivo imaging, Diffusion, Tissues, Optical imaging, Chest, Picosecond phenomena, Image transmission, Scattering, Optical testing
J. Biomed. Opt. 11(6), 064018 (1 November 2006) https://doi.org/10.1117/1.2400910
TOPICS: Functional magnetic resonance imaging, Optical testing, Geometrical optics, Diffuse optical imaging, Magnetic resonance imaging, Monte Carlo methods, Absorption, Hemodynamics, Head, Inverse optics
Qing Zhao, Lijun Ji, Tianzi Jiang
J. Biomed. Opt. 11(6), 064019 (1 November 2006) https://doi.org/10.1117/1.2400703
TOPICS: Image quality, Sensors, Chromium, Reflectivity, Diffuse optical imaging, Signal detection, Optical fibers, Spatial resolution, Signal to noise ratio, Human subjects
Kandice Tanner, Erin Beitel, Enrico D'Amico, William Mantulin, Enrico Gratton
J. Biomed. Opt. 11(6), 064020 (1 November 2006) https://doi.org/10.1117/1.2398920
TOPICS: Scattering, Absorption, Opacity, Brain, Tissue optics, Absorbance, Chromophores, Tissues, Intrinsic optical signal, Blood vessels
Ulas Sunar, H. Quon, Turgut Durduran, Jun Zhang, Juan Du, Chao Zhou, Guoqiang Yu, Regine Choe, Alex Kilger, Robert Lustig, Laurie Loevner, Shoko Nioka, Britton Chance, Arjun Yodh
J. Biomed. Opt. 11(6), 064021 (1 November 2006) https://doi.org/10.1117/1.2397548
TOPICS: Tumors, Blood circulation, Neck, Tissue optics, Optical testing, Tissues, Radiotherapy, Head, Sensors, Blood
Lindsey Nelson, John McCann, Andreas Loepke, Jun Wu, Baruch Ben-Dor, Dean Kurth
J. Biomed. Opt. 11(6), 064022 (1 November 2006) https://doi.org/10.1117/1.2393251
TOPICS: Oxygen, Near infrared spectroscopy, Sensors, Brain, Blood, Hypoxia, Signal to noise ratio, Instrument modeling, Tissue optics, Oximeters
Richard Spencer, Ericka Calton, Nancy Camacho
J. Biomed. Opt. 11(6), 064023 (1 November 2006) https://doi.org/10.1117/1.2393231
TOPICS: Signal to noise ratio, Transmittance, Absorbance, FT-IR spectroscopy, Statistical analysis, Cartilage, Spectroscopy, Interference (communication), Fourier transforms, Infrared spectroscopy
Judith Mourant, Jorge Dominguez, Susan Carpenter, Kurt Short, Tamara Powers, Ryszard Michalczyk, Nagapratima Kunapareddy, Anabel Guerra, James Freyer
J. Biomed. Opt. 11(6), 064024 (1 November 2006) https://doi.org/10.1117/1.2400213
TOPICS: Raman spectroscopy, Proteins, Spectroscopy, Biological research, Flow cytometry, FT-IR spectroscopy, Light scattering, Infrared radiation, Absorbance, Raman scattering
Kong-Thon Tsen, Shaw-Wei Tsen, Juliann Kiang
J. Biomed. Opt. 11(6), 064025 (1 November 2006) https://doi.org/10.1117/1.2398884
TOPICS: Oxygen, Molecules, Raman spectroscopy, Energy transfer, Ultrafast laser spectroscopy, Molecular energy transfer, Light scattering, Pulsed laser operation, Picosecond phenomena, Luminescence
Elena Salomatina, Brian Jiang, John Novak, Anna Yaroslavsky
J. Biomed. Opt. 11(6), 064026 (1 November 2006) https://doi.org/10.1117/1.2398928
TOPICS: Absorption, Scattering, Skin, Optical properties, Tissues, Skin cancer, Confocal microscopy, Cancer, Tumors, Integrating spheres
Dizem Arifler, Calum MacAulay, Michelle Follen, Rebecca Richards-Kortum
J. Biomed. Opt. 11(6), 064027 (1 November 2006) https://doi.org/10.1117/1.2398932
TOPICS: Reflectivity, Monte Carlo methods, Tissues, Scattering, Tissue optics, Absorption, Reflectance spectroscopy, Photons, Optical properties, Refractive index
J. Biomed. Opt. 11(6), 064028 (1 November 2006) https://doi.org/10.1117/1.2402114
TOPICS: Skin, Laser irradiation, Thermal modeling, Laser damage threshold, Temperature metrology, Standards development, Absorption, Tissue optics, Optical simulations, Tissues
J. Biomed. Opt. 11(6), 064029 (1 November 2006) https://doi.org/10.1117/1.2400595
TOPICS: Reconstruction algorithms, Brain, Functional magnetic resonance imaging, Monte Carlo methods, Signal processing, Sensors, Absorption, Signal to noise ratio, Spectroscopy, Scattering
Xincheng Yao, John George
J. Biomed. Opt. 11(6), 064030 (1 November 2006) https://doi.org/10.1117/1.2393155
TOPICS: Retina, Visible radiation, Near infrared, Signal to noise ratio, Optical testing, Tissue optics, Image resolution, Neurons, Optical imaging, Polarization
Jan van de Kraats, Tos Berendschot, Suze Valen, Dirk van Norren
J. Biomed. Opt. 11(6), 064031 (1 November 2006) https://doi.org/10.1117/1.2398925
TOPICS: Eye, Blood, Reflectivity, Calibration, Data modeling, Absorption, Reflectometry, Reflection, Retina, Lenses
Charles Munnerlyn, Mark Arnoldussen, Audrey Munnerlyn, Benjamin Logan
J. Biomed. Opt. 11(6), 064032 (1 November 2006) https://doi.org/10.1117/1.2399091
TOPICS: Laser ablation, Cornea, Opacity, Laser tissue interaction, Excimer lasers, Tissue optics, Laser therapeutics, Polymethylmethacrylate, Molecules, Absorption
J. Biomed. Opt. 11(6), 064033 (1 November 2006) https://doi.org/10.1117/1.2393091
TOPICS: Eye, Laser damage threshold, Retina, Eye models, Laser induced damage, Helium neon lasers, Motion estimation, Continuous wave operation, Laser safety, Thermal effects
Vladimir Zharov, Valentin Galitovsky, Christopher Lyle, Timothy Chambers
J. Biomed. Opt. 11(6), 064034 (1 November 2006) https://doi.org/10.1117/1.2405349
TOPICS: Absorption, Cell death, Pulsed laser operation, Control systems, Laser energy, Laser beam diagnostics, Microscopy, Microscopes, Signal detection, Charge-coupled devices
E. Qu, Honglian Guo, Chunhua Xu, Chunxiang Liu, Zhaolin Li, Bing-Ying Cheng, Daozhong Zhang
J. Biomed. Opt. 11(6), 064035 (1 November 2006) https://doi.org/10.1117/1.2397575
TOPICS: Proteins, Signal detection, Optical tweezers, Sensors, Photodiodes, Physics, Beam splitters, Lenses, Objectives, Condensed matter physics
Mahsa Ranji, Shinya Kanemoto, Muneaki Matsubara, Michael Grosso, Joseph Gorman, Robert Gorman, Dwight Jaggard, Britton Chance
J. Biomed. Opt. 11(6), 064036 (1 November 2006) https://doi.org/10.1117/1.2400701
TOPICS: Cell death, Heart, Luminescence, Imaging spectroscopy, Signal detection, In vivo imaging, Ischemia, Tissue optics, Fluorescence spectroscopy, Tissues
Stoyan Tanev, Valery Tuchin, Paul Paddon
J. Biomed. Opt. 11(6), 064037 (1 November 2006) https://doi.org/10.1117/1.2400239
TOPICS: Nanoparticles, Gold, Finite-difference time-domain method, Near field, Biomedical optics, Light scattering, Near field optics, Phase contrast, Computer simulations, Tumor growth modeling
Errata
Alessandro Della Villa, Giorgio Pagani, Silvia Versari, Anna Maria Villa, Silvia Maria Doglia, Silvia Bradamante
J. Biomed. Opt. 11(6), 069802 (1 November 2006) https://doi.org/10.1117/1.2404967
Yuchuan Chen, Robert Underwood, Marcia Usui, Xingde Li, Michael Cobb, John Olerud
J. Biomed. Opt. 11(6), 069803 (1 November 2006) https://doi.org/10.1117/1.2430730
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