journal of biomedical optics
VOL. 14 · NO. 4 | July 2009
CONTENTS
IN THIS ISSUE

Errata (2)
JBO Letters
Jiji Chen, Chungang Wang, Joseph Irudayaraj
J. Biomed. Opt. 14(4), 040501 (1 July 2009) doi:10.1117/1.3183789
TOPICS: Diffusion, Blood, Fluorescence correlation spectroscopy, Gold, Nanoparticles, Proteins, Molecules, Luminescence, Confocal microscopy, Single molecule spectroscopy
Zhe Sun, Ameet Juriani, Gerald Meininger, Kenith Meissner
J. Biomed. Opt. 14(4), 040502 (1 July 2009) doi:10.1117/1.3174429
TOPICS: Fluorescence resonance energy transfer, Luminescence, Atomic force microscopy, Atomic force microscope, Resonance energy transfer, Proteins, Silica, Epoxies, Quantum dots, Fluorescent proteins
J. Biomed. Opt. 14(4), 040503 (1 July 2009) doi:10.1117/1.3194136
TOPICS: Skull, Brain, Blood, Brain imaging, Capillaries, Photoacoustic microscopy, In vivo imaging, Neuroimaging, Oxygen, Absorption
Janaka Ranasinghesagara, Yan Jian, Xuhui Chen, Kory Mathewson, Roger Zemp
J. Biomed. Opt. 14(4), 040504 (1 July 2009) doi:10.1117/1.3200922
TOPICS: Photoacoustic spectroscopy, Tissue optics, Ultrasonography, Scattering, Laser scattering, Tissues, Liquids, Light scattering, Soft tissue optics, Acoustics
Yali Jia, Nabil Alkayed, Ruikang Wang
J. Biomed. Opt. 14(4), 040505 (1 July 2009) doi:10.1117/1.3207121
TOPICS: Traumatic brain injury, Blood, Blood circulation, In vivo imaging, Tissue optics, Brain, Image resolution, Capillaries, 3D image processing, Visualization
Hieu Dang, Gen Omura, Toshiyuki Omano, Masatomo Yamagiwa, Shin'ichiro Kajiyama, Yasuyuki Ozeki, Kazuyoshi Itoh, Kiichi Fukui
J. Biomed. Opt. 14(4), 040506 (1 July 2009) doi:10.1117/1.3207151
TOPICS: Microscopy, Visualization, Spatial light modulators, Optical filters, Signal processing, Mirrors, Dispersion, Luminescence, 3D image processing, Phase matching
J. Biomed. Opt. 14(4), 040507 (1 July 2009) doi:10.1117/1.3207156
TOPICS: Luminescence, Positron emission tomography, In vivo imaging, Radio optics, Nuclear imaging, Near infrared, Optical imaging, Tumors, Diagnostics, Tissues
Research Papers
J. Biomed. Opt. 14(4), 044001 (1 July 2009) doi:10.1117/1.3158994
TOPICS: Pellicles, Teeth, Optical coherence tomography, Tissues, In vivo imaging, 3D image processing, Natural surfaces, Tissue optics, 3D image reconstruction, Biomedical optics
Saman Manesh, Cynthia Darling, Daniel Fried
J. Biomed. Opt. 14(4), 044002 (1 July 2009) doi:10.1117/1.3158995
TOPICS: Minerals, Reflectivity, Optical coherence tomography, Nondestructive evaluation, Dental caries, Microscopy, Polarized microscopy, Polarization, Teeth, In vivo imaging
Julian Espinosa, David Mas, Henryk Kasprzak
J. Biomed. Opt. 14(4), 044003 (1 July 2009) doi:10.1117/1.3158996
TOPICS: Monochromatic aberrations, Eye, Point spread functions, Crystals, Eye models, Cornea, Geometrical optics, Wavefronts, Biomedical optics, Retina
S-ja Tseng, Ying-Hui Lee, Zhi-Hao Chen, Hui-Hao Lin, Chih-Yung Lin, Shiue-Cheng Tang
J. Biomed. Opt. 14(4), 044004 (1 July 2009) doi:10.1117/1.3158998
TOPICS: Confocal microscopy, Collagen, 3D image processing, Optical clearing, Microscopy, Tissue optics, Video, Photomicroscopy, Integrated optics, Optical microscopy
J. Biomed. Opt. 14(4), 044005 (1 July 2009) doi:10.1117/1.3160548
TOPICS: Absorption, Optical properties, Breast, Ultrasonography, Chest, Scattering, Interfaces, Calibration, Tissues, Sensors
Mark Mackanos, John Hargrove, Rolf Wolters, Christine Du, Shai Friedland, Roy Soetikno, Christopher Contag, May Arroyo, James Crawford, Thomas Wang
J. Biomed. Opt. 14(4), 044006 (1 July 2009) doi:10.1117/1.3174387
TOPICS: FT-IR spectroscopy, Optical fibers, Tissues, Proteins, Silver, Absorbance, Endoscopy, Algorithm development, Binary data, Spectroscopy
G. Wenzel, S. Balster, K. Zhang, H. Lim, U. Reich, Ole Massow, Holger Lubatschowski, Wolfgang Ertmer, T. Lenarz, G. Reuter
J. Biomed. Opt. 14(4), 044007 (1 July 2009) doi:10.1117/1.3174389
TOPICS: Ear, Acoustics, Optical fibers, Sensors, Nerve, Pulsed laser operation, Electrodes, Visible radiation, Laser tissue interaction, Biomedical optics
Francesca Palombo, Charlene Danoux, Peter Weinberg, Sergei Kazarian
J. Biomed. Opt. 14(4), 044008 (1 July 2009) doi:10.1117/1.3174395
TOPICS: FT-IR spectroscopy, Tissues, Diffusion, Macromolecules, Absorbance, Spectroscopy, Imaging spectroscopy, Crystals, Molecules, Natural surfaces
Mark Mackanos, Malika Larabi, Rajesh Shinde, Dmitrii Simanovskii, Samira Guccione, Christopher Contag
J. Biomed. Opt. 14(4), 044009 (1 July 2009) doi:10.1117/1.3174410
TOPICS: Bioluminescence, In vivo imaging, Imaging systems, Tissues, Neodymium lasers, Laser tissue interaction, Molecules, Temperature metrology, Luminescence, Forward looking infrared
J. Biomed. Opt. 14(4), 044010 (1 July 2009) doi:10.1117/1.3171943
TOPICS: Optical coherence tomography, Algorithm development, Wavelets, Imaging systems, Tissues, Biological research, Image analysis, Detection and tracking algorithms, Cancer, Image resolution
Simona Ferrante, Davide Contini, Lorenzo Spinelli, Alessandra Pedrocchi, Alessandro Torricelli, Franco Molteni, Giancarlo Ferrigno, Rinaldo Cubeddu
J. Biomed. Opt. 14(4), 044011 (1 July 2009) doi:10.1117/1.3183802
TOPICS: Near infrared spectroscopy, Mode conditioning cables, Hemodynamics, Blood circulation, Oxygen, Robotics, Optical fibers, Pathology, Tissues, Motion analysis
Szu-Yu Chen, Han-Chieh Yu, I-Jong Wang, Chi-Kuang Sun
J. Biomed. Opt. 14(4), 044012 (1 July 2009) doi:10.1117/1.3183805
TOPICS: Cornea, Eye, Second-harmonic generation, Harmonic generation, Infrared imaging, Retina, Optical fibers, Infrared radiation, Collagen, Safety
Dean Tai, Nancy Tan, Shuoyu Xu, Chiang Huen Kang, Ser Mien Chia, Chee Leong Cheng, Aileen Wee, Chiang Li Wei, Anju Raja, Guangfa Xiao, Shi Chang, Jagath Rajapakse, Peter So, Hui-Huan Tang, Chien Shing Chen, Hanary Yu
J. Biomed. Opt. 14(4), 044013 (1 July 2009) doi:10.1117/1.3183811
TOPICS: Liver, Collagen, Second-harmonic generation, Tissues, Microscopy, Image segmentation, Algorithm development, Tissue optics, Harmonic generation, Animal model studies
Seow Hwang Eng, Fred Reinholz, Douglas Chai
J. Biomed. Opt. 14(4), 044014 (1 July 2009) doi:10.1117/1.3183814
TOPICS: Adaptive optics, Wavefronts, Point spread functions, Spatial light modulators, Eye, Imaging systems, Image resolution, Retinal scanning, Visualization, Retina
Ying Chang, Changshui Chen, Jianxin Chen, Ying Jin, Xiao-Yuan Deng
J. Biomed. Opt. 14(4), 044016 (1 July 2009) doi:10.1117/1.3174427
TOPICS: Second-harmonic generation, Polarization, Collagen, Chromium, Optical simulations, Phase shifts, Laser applications, Solids, Life sciences, Microscopes
J. Biomed. Opt. 14(4), 044017 (1 July 2009) doi:10.1117/1.3184425
TOPICS: Tissue optics, Absorption, Tissues, Ultrasonography, Signal attenuation, Optical testing, Scattering, Near infrared spectroscopy, Spectroscopy, Skin
Kathryn Dooley, Jordan McCormack, David Fyhrie, Michael Morris
J. Biomed. Opt. 14(4), 044018 (1 July 2009) doi:10.1117/1.3184435
TOPICS: Bone, Raman spectroscopy, Minerals, Tissues, Mirrors, Charge-coupled devices, Microscopes, Spectroscopy, Light scattering, Collagen
Maxwell Zimmerley, Chia-Yu Lin, David Oertel, Jennifer Marsh, Jimmie Ward, Eric Potma
J. Biomed. Opt. 14(4), 044019 (1 July 2009) doi:10.1117/1.3184444
TOPICS: Raman spectroscopy, Microscopy, Optical fibers, Water, Molecules, CARS tomography, Calibration, Chemical compounds, Scattering, Glasses
Aiping Liu, Ruikang Wang, Kent Thornburg, Sandra Rugonyi
J. Biomed. Opt. 14(4), 044020 (1 July 2009) doi:10.1117/1.3184462
TOPICS: Heart, Optical coherence tomography, Phase shifts, Spatial light modulators, Image acquisition, Imaging systems, Feature extraction, Data acquisition, Tissues, Image restoration
Jelena Mirkovic, Condon Lau, Sasha McGee, Chung-Chieh Yu, Jonathan Nazemi, Luis Galindo, Victoria Feng, Teresa Darragh, Antonio de las Morenas, Christopher Crum, Elizabeth Stier, Michael Feld, Kamran Badizadegan
J. Biomed. Opt. 14(4), 044021 (1 July 2009) doi:10.1117/1.3194142
TOPICS: Spectroscopy, Diagnostics, Algorithm development, Tissue optics, Reflectivity, Luminescence, Fluorescence spectroscopy, Tissues, Absorption, Imaging spectroscopy
Ying Zhu, Thomas Fearn, Gary Mackenzie, Benjamin Clark, Jason Dunn, Irving Bigio, Stephen Bown, Laurence Lovat
J. Biomed. Opt. 14(4), 044022 (1 July 2009) doi:10.1117/1.3194291
TOPICS: Cancer, In vivo imaging, Esophagus, Spectroscopy, Tissue optics, Tissues, Scattering, Diagnostics, Biopsy, Principal component analysis
J. Biomed. Opt. 14(4), 044023 (1 July 2009) doi:10.1117/1.3194293
TOPICS: Reconstruction algorithms, Signal detection, Transducers, Fourier transforms, Tomography, Algorithm development, Image restoration, Interference (communication), Lanthanum, Convolution
J. Biomed. Opt. 14(4), 044024 (1 July 2009) doi:10.1117/1.3194131
TOPICS: Confocal microscopy, Luminescence, Imaging systems, Tissues, Monte Carlo methods, Tissue optics, Scattering, Natural surfaces, Photon transport, Sensors
J. Biomed. Opt. 14(4), 044025 (1 July 2009) doi:10.1117/1.3200924
TOPICS: Acoustics, Tissues, Transducers, Signal processing, Signal to noise ratio, Modulation, Signal detection, Tissue optics, Chromophores, Absorption
Chih-Yu Wang, Tsuimin Tsai, Chun-Ping Chiang, Hsin-Ming Chen, Chin-Tin Chen
J. Biomed. Opt. 14(4), 044026 (1 July 2009) doi:10.1117/1.3200934
TOPICS: Luminescence, Nano opto mechanical systems, Tissues, Fluorescence spectroscopy, Spectroscopy, Cancer, Diagnostics, Tissue optics, Biopsy, Collagen
Jangwoen Lee, Jae Gwan Kim, Sari Mahon, Bruce Tromberg, David Mukai, Kelly Kreuter, Darin Saltzman, Renee Patino, Robert Goldberg, Matthew Brenner
J. Biomed. Opt. 14(4), 044027 (1 July 2009) doi:10.1117/1.3200932
TOPICS: Blood, Tissues, Rhodamine B, Tissue optics, Scattering, Oxygen, Diffuse optical spectroscopy, In vivo imaging, Near infrared, Surface plasmons
Meng-Tsan Tsai, Cheng-Kuang Lee, Hsiang-Chieh Lee, Hsin-Ming Chen, Chun-Ping Chiang, Yih-Ming Wang, Chih-Chung Yang
J. Biomed. Opt. 14(4), 044028 (1 July 2009) doi:10.1117/1.3200936
TOPICS: Optical coherence tomography, Cancer, Solids, Roads, Absorption, Photonics, Optoelectronics, Tissues, Optical scanning systems, Control systems
Hayden Huang, Catherine MacGillivray, Hyuk-Sang Kwon, Jan Lammerding, Jeffrey Robbins, Richard Lee, Peter So
J. Biomed. Opt. 14(4), 044029 (1 July 2009) doi:10.1117/1.3200939
TOPICS: Heart, Video, Tissues, 3D image processing, Two photon excitation microscopy, Mirrors, Quantitative analysis, Data acquisition, Imaging systems, Medicine
J. Biomed. Opt. 14(4), 044030 (1 July 2009) doi:10.1117/1.3207139
TOPICS: Confocal microscopy, In vivo imaging, Surgery, Tissues, Biopsy, Control systems, Cancer, Imaging systems, Ovary, Computing systems
Katrina Seet, Timo Nieminen, Andrei Zyvagin
J. Biomed. Opt. 14(4), 044031 (1 July 2009) doi:10.1117/1.3207141
TOPICS: Refractive index, Design for manufacturing, Scattering, Microscopy, Holograms, Refractometry, Biomedical optics, Fourier transforms, Light scattering, Charge-coupled devices
Shingo Sakai, Noriaki Nakagawa, Masahiro Yamanari, Arata Miyazawa, Yoshiaki Yasuno, Masayuki Matsumoto
J. Biomed. Opt. 14(4), 044032 (1 July 2009) doi:10.1117/1.3207142
TOPICS: Skin, Birefringence, Collagen, Radium, Surface roughness, Optical fibers, Optical coherence tomography, Polarization, CCD cameras, Samarium
J. Biomed. Opt. 14(4), 044033 (1 July 2009) doi:10.1117/1.3210767
TOPICS: Image segmentation, Prostate, Optical coherence tomography, Image filtering, Prostate cancer, Surgery, Nerve, Wavelets, Image processing algorithms and systems, Feature extraction
J. Biomed. Opt. 14(4), 044034 (1 July 2009) doi:10.1117/1.3210768
TOPICS: Tissues, Lung, Second-harmonic generation, Lung cancer, Cancer, Optical fibers, Multiphoton microscopy, Tumors, Collagen, Roads
C. Madeira, N. Estrela, J. A. B. Ferreira, S. M. Andrade, S. M. B. Costa, E. P. Melo
J. Biomed. Opt. 14(4), 044035 (1 July 2009) doi:10.1117/1.3210770
TOPICS: Proteins, Fluorescence resonance energy transfer, Fluorescence lifetime imaging, Solids, Luminescence, Microscopy, Fluorescent proteins, Water, Molecules, Biotechnology
Alexandre Douplik, Wey-Liang Leong, Alexandra Easson, S. Done, George Netchev, Brian Wilson
J. Biomed. Opt. 14(4), 044036 (1 July 2009) doi:10.1117/1.3210773
TOPICS: Tissues, Luminescence, Tumors, Tissue optics, Imaging spectroscopy, Diffuse reflectance spectroscopy, Reflectivity, Cancer, Spectroscopy, Algorithm development
Kelly Kreuter, Sari Mahon, David Mukai, Jianping Su, Woonggyu Jung, Navneet Narula, S. Guo, Nicole Wakida, Christopher Raub, Michael Berns, Steven George, Zhongping Chen, Matthew Brenner
J. Biomed. Opt. 14(4), 044037 (1 July 2009) doi:10.1117/1.3210775
TOPICS: Injuries, Optical coherence tomography, Imaging systems, Blistering agents, Tissues, Lung, Animal model studies, Fiber optics, Image resolution, Luminescence
J. Biomed. Opt. 14(4), 044038 (1 July 2009) doi:10.1117/1.3210779
TOPICS: Blood circulation, Oxygen, Hemodynamics, Blood, Cerebral blood flow, Brain, Mode conditioning cables, Data modeling, Physiology, Resistance
J. Biomed. Opt. 14(4), 044039 (1 July 2009) doi:10.1117/1.3210780
TOPICS: Teeth, Calcium, Luminescence, Dental caries, Cadmium, Minerals, Laser dentistry, Fluorescence spectroscopy, Operative dentistry, Monochromators
J. Biomed. Opt. 14(4), 044040 (1 July 2009) doi:10.1117/1.3210781
TOPICS: Brain, Thalamus, Tissue optics, Scattering, Blood, Electrodes, Tissues, Monte Carlo methods, Light scattering, Optical fibers
Wojciech Glinkowski, Robert Sitnik, Marcin Witkowski, Hanna Kocon, Paweł Bolewicki, Andrzej Górecki
J. Biomed. Opt. 14(4), 044041 (1 July 2009) doi:10.1117/1.3210782
TOPICS: 3D metrology, Computed tomography, Chest, 3D scanning, Clouds, 3D image processing, Photonics, Shape analysis, Photography, Structured light
Errata
J. Biomed. Opt. 14(4), 049801 (1 July 2009) doi:10.1117/1.3223334
TOPICS: Medicine, Health sciences, Roads, Head
J. Biomed. Opt. 14(4), 049802 (1 July 2009) doi:10.1117/1.3223332
TOPICS: Imaging systems, Acousto-optics, Systems modeling, Biomedical optics, Tissues, Tissue optics, Biomedical engineering, Physics
Back to Top