Journal of Biomedical Optics
VOL. 14 · NO. 5 | September 2009
CONTENTS
IN THIS ISSUE

Editorial (1)
Errata (3)
Editorial
J. Biomed. Opt. 14(5), 050101 (1 September 2009) https://doi.org/10.1117/1.3258205
TOPICS: Biomedical optics, Coherence imaging, Preclinical imaging, Fluorescent proteins, Photonics, Raman spectroscopy, Medicine, Databases, Multimedia, Graphic arts
JBO Letters
J. Biomed. Opt. 14(5), 050501 (1 September 2009) https://doi.org/10.1117/1.3213569
TOPICS: Mirrors, Eye, Image segmentation, Optical coherence tomography, In vivo imaging, Cornea, Imaging systems, Scanners, Fourier transforms, Spectroscopy
J. Biomed. Opt. 14(5), 050502 (1 September 2009) https://doi.org/10.1117/1.3223246
TOPICS: Bladder, Optical coherence tomography, Bladder cancer, Speckle, Tissue optics, Cancer, 3D image processing, 3D image enhancement, Imaging systems, Endoscopy
J. Biomed. Opt. 14(5), 050503 (1 September 2009) https://doi.org/10.1117/1.3227034
TOPICS: Diffusion, Polymers, Molecules, Speckle pattern, Data modeling, Interferometry, Refractive index, Chemistry, Molecular interactions, Charge-coupled devices
J. Biomed. Opt. 14(5), 050504 (1 September 2009) https://doi.org/10.1117/1.3233590
TOPICS: Microfluidics, Microfluidic imaging, Tissue optics, Tissues, Doppler tomography, Interference (communication), Scattering, Optical coherence tomography, Tissue engineering, Imaging systems
J. Biomed. Opt. 14(5), 050505 (1 September 2009) https://doi.org/10.1117/1.3233629
TOPICS: Scattering, Light scattering, Plasma, Luminescence, Capillaries, Tissue optics, Skin, Blood, Tissues, Raman spectroscopy
J. Biomed. Opt. 14(5), 050506 (1 September 2009) https://doi.org/10.1117/1.3241044
TOPICS: Optical coherence tomography, Heart, Doppler tomography, Doppler effect, 3D image processing, 3D modeling, Imaging systems, Physiology, Blood circulation, Genetics
Research Papers
J. Biomed. Opt. 14(5), 054001 (1 September 2009) https://doi.org/10.1117/1.3213603
TOPICS: Wound healing, Skin, Tissues, Luminescence, In vivo imaging, Tissue optics, Laser scanners, Microscopy, Dermatology, Optical fibers
J. Biomed. Opt. 14(5), 054002 (1 September 2009) https://doi.org/10.1117/1.3213604
TOPICS: Optical coherence tomography, Tissues, Heart, Natural surfaces, Optical fibers, Visualization, Imaging systems, Spatial resolution, Arteries, Computed tomography
J. Biomed. Opt. 14(5), 054004 (1 September 2009) https://doi.org/10.1117/1.3213601
TOPICS: Mirrors, Luminescence, Double sideband modulation, Confocal microscopy, Infrared telescopes, Objectives, Microscopes, Optical tweezers, Ultraviolet radiation, Optical filters
J. Biomed. Opt. 14(5), 054005 (1 September 2009) https://doi.org/10.1117/1.3213606
TOPICS: Luminescence, In vivo imaging, Nanoparticles, Quantum efficiency, Particles, Tumors, Optical properties, Magnesium, Absorption, Absorbance
J. Biomed. Opt. 14(5), 054006 (1 September 2009) https://doi.org/10.1117/1.3233652
TOPICS: Blood, Luminescence, Photons, Absorption, Optical testing, Monte Carlo methods, Calibration, Indocyanine green, Scattering, Biological research
J. Biomed. Opt. 14(5), 054007 (1 September 2009) https://doi.org/10.1117/1.3227035
TOPICS: Brain, Neuroimaging, Transducers, Imaging systems, Acquisition tracking and pointing, Photoacoustic tomography, In vivo imaging, Photoacoustic spectroscopy, 3D image processing, Brain imaging
J. Biomed. Opt. 14(5), 054008 (1 September 2009) https://doi.org/10.1117/1.3233653
TOPICS: Optical coherence tomography, Collagen, Mouth, Tissues, Statistical analysis, Photomicroscopy, Photonics, Optoelectronics, Roads, Biopsy
J. Biomed. Opt. 14(5), 054009 (1 September 2009) https://doi.org/10.1117/1.3227036
TOPICS: Fluorescence resonance energy transfer, Microscopy, Fluorescent proteins, Luminescence, Imaging systems, Fluorescence lifetime imaging, Proteins, Argon ion lasers, Sun, Quantum efficiency
J. Biomed. Opt. 14(5), 054010 (1 September 2009) https://doi.org/10.1117/1.3227037
TOPICS: Tissues, Collagen, Tissue optics, Injuries, Signal to noise ratio, Tolerancing, Failure analysis, Kinematics, Data acquisition, Optical alignment
J. Biomed. Opt. 14(5), 054011 (1 September 2009) https://doi.org/10.1117/1.3227038
TOPICS: Tissues, Transducers, Tissue optics, Natural surfaces, Acoustics, Speckle, Signal attenuation, Ultrasonography, Reconstruction algorithms, Absorption
J. Biomed. Opt. 14(5), 054012 (1 September 2009) https://doi.org/10.1117/1.3233654
TOPICS: Absorption, Skin, Diffuse reflectance spectroscopy, Tissues, Reflectivity, Ear, In vivo imaging, Proteins, Digital imaging, Ocean optics
J. Biomed. Opt. 14(5), 054013 (1 September 2009) https://doi.org/10.1117/1.3233655
TOPICS: Diffusion, X-rays, Scattering, Tissues, Absorption, 3D modeling, Bone, Optical properties, Optical tomography, X-ray imaging
J. Biomed. Opt. 14(5), 054014 (1 September 2009) https://doi.org/10.1117/1.3233916
TOPICS: Ultrasonography, Photoacoustic spectroscopy, Ovary, Imaging systems, Photoacoustic imaging, Transducers, Tissue optics, Ovarian cancer, 3D image processing, Cancer
J. Biomed. Opt. 14(5), 054015 (1 September 2009) https://doi.org/10.1117/1.3233946
TOPICS: Gold, Tumors, Optical coherence tomography, Tissues, Tissue optics, In vivo imaging, Natural surfaces, Scattering, Biomedical optics, Signal attenuation
J. Biomed. Opt. 14(5), 054016 (1 September 2009) https://doi.org/10.1117/1.3241984
TOPICS: Hemodynamics, Functional magnetic resonance imaging, Brain, Prefrontal cortex, Superposition, Near infrared spectroscopy, Nonlinear optics, Data analysis, Wavelets, Continuous wavelet transforms
J. Biomed. Opt. 14(5), 054017 (1 September 2009) https://doi.org/10.1117/1.3241985
TOPICS: Green fluorescent protein, Pancreas, Tissues, Brain, Medical research, Transplantation, Liver, Medicine, Skin, Kidney
J. Biomed. Opt. 14(5), 054018 (1 September 2009) https://doi.org/10.1117/1.3241986
TOPICS: Collagen, Tissues, Anisotropy, Tissue optics, Birefringence, Biomedical optics, Cartilage, Wave plates, Microscopy, Polarizers
J. Biomed. Opt. 14(5), 054019 (1 September 2009) https://doi.org/10.1117/1.3253303
TOPICS: Cell death, Luminescence, Tissues, Tumors, Molecular imaging, In vivo imaging, Microscopy, Endoscopy, Intestine, Visualization
J. Biomed. Opt. 14(5), 054020 (1 September 2009) https://doi.org/10.1117/1.3247149
TOPICS: Optical coherence tomography, Lung, 3D image processing, Mechanics, Microscopy, Image segmentation, Tissues, In vivo imaging, 3D modeling, Imaging systems
J. Biomed. Opt. 14(5), 054021 (1 September 2009) https://doi.org/10.1117/1.3247151
TOPICS: Tumors, Tissue optics, Brain, Tissues, Spectroscopy, Light scattering, Singular optics, Photons, Scattering, Refraction
J. Biomed. Opt. 14(5), 054022 (1 September 2009) https://doi.org/10.1117/1.3247152
TOPICS: Near infrared spectroscopy, Hemodynamics, Signal processing, Electrodes, Performance modeling, Prefrontal cortex, Brain, Signal detection, Cognition, Biomedical optics
J. Biomed. Opt. 14(5), 054023 (1 September 2009) https://doi.org/10.1117/1.3247154
TOPICS: Raman spectroscopy, Tissues, Diagnostics, Calibration, Breast, Breast cancer, Algorithm development, Surface plasmons, Cancer, Spectroscopy
J. Biomed. Opt. 14(5), 054024 (1 September 2009) https://doi.org/10.1117/1.3247155
J. Biomed. Opt. 14(5), 054025 (1 September 2009) https://doi.org/10.1117/1.3247156
TOPICS: Plasma, Skin, Tissues, Dermatology, Ultraviolet radiation, Natural surfaces, In vivo imaging, Quartz, Temperature metrology, Ear
J. Biomed. Opt. 14(5), 054026 (1 September 2009) https://doi.org/10.1117/1.3247157
TOPICS: Skin, Second-harmonic generation, Cornea, Signal detection, Confocal microscopy, Multiphoton microscopy, Tissues, Tissue optics, Refractive index, Roads
J. Biomed. Opt. 14(5), 054027 (1 September 2009) https://doi.org/10.1117/1.3253318
TOPICS: Surgery, Testis, Tissues, Near infrared spectroscopy, Tissue optics, Absorption, Optical fibers, Scattering, Oxygen, Diagnostics
J. Biomed. Opt. 14(5), 054028 (1 September 2009) https://doi.org/10.1117/1.3250293
TOPICS: Cadmium, Luminescence, Microscopy, Proteins, Toxicity, Lithium, Metals, Electron transport, Cell death, Electronics engineering
J. Biomed. Opt. 14(5), 054029 (1 September 2009) https://doi.org/10.1117/1.3250292
TOPICS: Monte Carlo methods, Composites, Scattering, Optical properties, Reflectivity, Color vision, Absorption, Teeth, Light scattering, Particles
J. Biomed. Opt. 14(5), 054030 (1 September 2009) https://doi.org/10.1117/1.3251051
TOPICS: Breast, Absorption, Collagen, Tissue optics, Tissues, Scattering, In vivo imaging, Diffuse optical spectroscopy, Diagnostics, Spectroscopy
J. Biomed. Opt. 14(5), 054031 (1 September 2009) https://doi.org/10.1117/1.3251053
TOPICS: Raman spectroscopy, Tissues, Skin, Tumors, Imaging spectroscopy, Tissue optics, Data modeling, Surgery, Skin cancer, Tumor growth modeling
J. Biomed. Opt. 14(5), 054032 (1 September 2009) https://doi.org/10.1117/1.3253323
TOPICS: Independent component analysis, Principal component analysis, Near infrared spectroscopy, Hemodynamics, Natural surfaces, Sensors, Electronic filtering, Tissue optics, Signal detection, Tissues
J. Biomed. Opt. 14(5), 054033 (1 September 2009) https://doi.org/10.1117/1.3253319
TOPICS: Iron, Spectroscopy, Mid-IR, Statistical analysis, Proteins, Profiling, Liver, Infrared spectroscopy, Mode conditioning cables, Genetics
J. Biomed. Opt. 14(5), 054034 (1 September 2009) https://doi.org/10.1117/1.3253320
TOPICS: Particles, Gold, Pulsed laser operation, Picosecond phenomena, Nanoparticles, Luminescence, Biomedical optics, Laser irradiation, Cell death, Proteins
J. Biomed. Opt. 14(5), 054036 (1 September 2009) https://doi.org/10.1117/1.3253332
TOPICS: Systems modeling, Optical fibers, Diffusion, Foam, Statistical modeling, Anisotropic diffusion, Scattering, Anisotropy, Biomedical optics, Data modeling
J. Biomed. Opt. 14(5), 054037 (1 September 2009) https://doi.org/10.1117/1.3251059
TOPICS: Optical coherence tomography, Image classification, Skin, Sun, Image analysis, Tissues, Principal component analysis, Image retrieval, Image resolution, Computer science
J. Biomed. Opt. 14(5), 054038 (1 September 2009) https://doi.org/10.1117/1.3253350
TOPICS: Near infrared spectroscopy, Signal to noise ratio, Optical testing, Sensors, Biological research, Biomedical optics, Signal attenuation, Solids, Human subjects, Absorption
J. Biomed. Opt. 14(5), 054039 (1 September 2009) https://doi.org/10.1117/1.3253353
TOPICS: Blood, Tissues, Tissue optics, Calibration, Capillaries, Spectroscopy, Near infrared spectroscopy, Bioalcohols, Spectroscopes, Absorption
J. Biomed. Opt. 14(5), 054040 (1 September 2009) https://doi.org/10.1117/1.3253382
TOPICS: Luminescence, Molecules, Oxygen, Surgery, Femtosecond phenomena, Laser therapeutics, Laser irradiation, Pulsed laser operation, Laser vision correction, Multiphoton microscopy
J. Biomed. Opt. 14(5), 054041 (1 September 2009) https://doi.org/10.1117/1.3253388
TOPICS: Second-harmonic generation, Luminescence, Signal generators, Ultrafast phenomena, Solids, Absorption, Gaussian pulse, Pulsed laser operation, Microscopy, Tissues
J. Biomed. Opt. 14(5), 054042 (1 September 2009) https://doi.org/10.1117/1.3251057
TOPICS: Gallium arsenide, Luminescence, Particles, Biosensors, Atomic force microscopy, Microscopy, Semiconductors, FT-IR spectroscopy, Molecules, Nanoparticles
J. Biomed. Opt. 14(5), 054043 (1 September 2009) https://doi.org/10.1117/1.3253386
TOPICS: Monte Carlo methods, Skin, Optical properties, Diffusion, Scattering, Photon transport, Absorption, Performance modeling, Tissue optics, Sensors
J. Biomed. Opt. 14(5), 054044 (1 September 2009) https://doi.org/10.1117/1.3251050
TOPICS: Lawrencium, Blood, Plasma, Amplifiers, Reflectivity, Artificial intelligence, Physiology, Medicine, Signal detection, Macromolecules
J. Biomed. Opt. 14(5), 054045 (1 September 2009) https://doi.org/10.1117/1.3253390
TOPICS: Near infrared, Laser ablation, Imaging systems, Teeth, Dental caries, Gas lasers, Optical coherence tomography, Laser systems engineering, Carbon monoxide, Reflectivity
J. Biomed. Opt. 14(5), 054046 (1 September 2009) https://doi.org/10.1117/1.3253396
TOPICS: Nondestructive evaluation, Wave propagation, Teeth, Dispersion, Ultrasonics, Optical fibers, Interferometers, Fiber lasers, Acoustics, In vivo imaging
J. Biomed. Opt. 14(5), 054047 (1 September 2009) https://doi.org/10.1117/1.3251049
TOPICS: Eye, Cornea, Interferometry, Tissue optics, Mirrors, Charge-coupled devices, Retina, Reflection, In vivo imaging, Distance measurement
J. Biomed. Opt. 14(5), 054048 (1 September 2009) https://doi.org/10.1117/1.3251036
TOPICS: Absorption, Tissues, Skin, Oxygen, Thermography, Temperature metrology, Tissue optics, Thermal modeling, Algorithm development, Biological research
J. Biomed. Opt. 14(5), 054049 (1 September 2009) https://doi.org/10.1117/1.3251044
TOPICS: Capillaries, Tissues, Blood, Diffusion, In vivo imaging, Blood vessels, Biomedical optics, Absorption, Tissue optics, Photoacoustic microscopy
J. Biomed. Opt. 14(5), 054050 (1 September 2009) https://doi.org/10.1117/1.3210766
TOPICS: Waveguides, Absorption, Absorbance, Glasses, Silicon, Infrared radiation, Biomedical optics, Hydrogen, Photodetectors, Optical activity
J. Biomed. Opt. 14(5), 054051 (1 September 2009) https://doi.org/10.1117/1.3251013
TOPICS: Tumors, Diffuse reflectance spectroscopy, Cancer, Chromium, Head, Neck, Optical spectroscopy, Oncology, Animal model studies, Tumor growth modeling
Errata
J. Biomed. Opt. 14(5), 059801 (1 September 2009) https://doi.org/10.1117/1.3223339
TOPICS: Photoacoustic imaging, Acoustics, Adhesives, Information technology, Physics, Quantum information, Polymethylmethacrylate