journal of biomedical optics
VOL. 15 · NO. 3 | May 2010
CONTENTS
Editorial
J. Biomed. Opt. 15(3), 030101 (1 May 2010) doi:10.1117/1.3446798
JBO Letters
J. Biomed. Opt. 15(3), 030502 (1 May 2010) doi:10.1117/1.3420149
TOPICS: Light scattering, Scattering, Spatial frequencies, Tissue optics, Correlation function, Imaging systems, Tissues, Laser scattering, Optical imaging, Microscopes
Natan Shaked, Yizheng Zhu, Nima Badie, Nenad Bursac, Adam Wax
J. Biomed. Opt. 15(3), 030503 (1 May 2010) doi:10.1117/1.3420179
TOPICS: Interferometry, Phase imaging, Interferometers, Reflectivity, Optical components, Phase measurement, Transmittance, Coating, Beam splitters, Digital cameras
Frank Tsai, Daniel Johnson, Cameron Francis, Sung-Hwan Cho
J. Biomed. Opt. 15(3), 030504 (1 May 2010) doi:10.1117/1.3420192
TOPICS: Laparoscopy, Cameras, Zoom lenses, Surgery, Light sources and illumination, Fluid dynamics, LED lighting, Abdomen, Stomach, Switches
J. Biomed. Opt. 15(3), 030505 (1 May 2010) doi:10.1117/1.3420209
TOPICS: Near infrared, Luminescence, Fiber lasers, Multiphoton microscopy, Absorption, Mirrors, Tissues, Microscopy, Visible radiation, Molecular imaging
J. Biomed. Opt. 15(3), 030507 (1 May 2010) doi:10.1117/1.3427249
TOPICS: Optical coherence tomography, Scattering, Tissue optics, Signal attenuation, Tissues, Confocal microscopy, Optical properties, Reflectivity, Microscopy, Transmittance
J. Biomed. Opt. 15(3), 030510 (1 May 2010) doi:10.1117/1.3432654
TOPICS: Blood circulation, Imaging systems, Capillaries, Tissue optics, Blood, Visualization, Brain, In vivo imaging, Optical imaging, 3D image processing
J. Biomed. Opt. 15(3), 030511 (1 May 2010) doi:10.1117/1.3437078
TOPICS: Optical coherence tomography, Image processing, Spectroscopy, Graphics processing units, Signal processing, Image quality, Fourier transforms, CCD cameras, LabVIEW, Prisms
J. Biomed. Opt. 15(3), 030512 (1 May 2010) doi:10.1117/1.3449107
TOPICS: In vitro testing, Laser damage threshold, Laser induced damage, Thermal modeling, Computer simulations, Optical simulations, Thermal effects, Eye models, Data modeling, In vivo imaging
J. Biomed. Opt. 15(3), 030513 (1 May 2010) doi:10.1117/1.3449109
TOPICS: In vivo imaging, Tumors, Pancreas, Tissues, Luminescence, Receptors, Image processing, Plasma, Data modeling, Image visualization
Kwan Jeong, John Turek, David Nolte
J. Biomed. Opt. 15(3), 030514 (1 May 2010) doi:10.1117/1.3456369
TOPICS: Speckle, Digital holography, Tissue optics, Tissues, Tumors, Holograms, Spectroscopy, Temperature metrology, Holography, Physics
Leilei Zhang, Jeff Xu, Virgil Sanders, Alan Letson, Cynthia Roberts, Ronald Xu
J. Biomed. Opt. 15(3), 030515 (1 May 2010) doi:10.1117/1.3457669
TOPICS: Luminescence, Ultrasonography, Multimodal imaging, Scanning electron microscopy, Imaging systems, Optical coherence tomography, Genetics, Standards development, Niobium, Chlorine
J. Biomed. Opt. 15(3), 030516 (1 May 2010) doi:10.1117/1.3459134
TOPICS: Optical coherence tomography, Radiofrequency ablation, Blood, Tissues, Visualization, Tissue optics, Heart, Prototyping, Coherence imaging, Natural surfaces
Jakob Mauritz, Teresa Tiffert, Rachel Seear, Franziska Lautenschlaeger, Alessandro Esposito, Virgilio Lew, Jochen Guck, Clemens Kaminski
J. Biomed. Opt. 15(3), 030517 (1 May 2010) doi:10.1117/1.3458919
TOPICS: Blood, Optical fibers, Microfluidics, Capillaries, Control systems, Shape analysis, Optical tweezers, Diagnostics, Optical testing, Finite element methods
Research Papers: General
J. Biomed. Opt. 15(3), 035001 (1 May 2010) doi:10.1117/1.3454390
TOPICS: Calcium, Femtosecond phenomena, Photostimulation, Acquisition tracking and pointing, Wave propagation, Luminescence, Brain, Receptors, Neurons, Ions
Nicolas Carbone, Hector Di Rocco, Daniela Iriarte, Juan Pomarico
J. Biomed. Opt. 15(3), 035002 (1 May 2010) doi:10.1117/1.3442750
TOPICS: Transmittance, Optical properties, Monte Carlo methods, Absorption, Scattering, Graphics processing units, Computer simulations, Biomedical optics, Cameras, Sensors
Research Papers: Imaging
Lena Karlsson, Ana Araújo Maia, Bernardo Kyotoku, Sofia Tranaeus, Anderson Gomes, Walter Margulis
J. Biomed. Opt. 15(3), 036001 (1 May 2010) doi:10.1117/1.3427135
TOPICS: Dental caries, Teeth, Modulation, CCD cameras, Near infrared, Spatial frequencies, Modulation transfer functions, Imaging systems, Spatial resolution, Light scattering
Tzu-Lin Sun, Yuan Liu, Ming-Chin Sung, Hsiao-Ching Chen, Chun-Hui Yang, Vladimir Hovhannisyan, Wei-Chou Lin, Yung-Ming Jeng, Wei-Liang Chen, Ling-Ling Chiou, Guan-Tarn Huang, Ki Hean Kim, Peter So, Yang-Fang Chen, Hsuan-Shu Lee, Chen-Yuan Dong
J. Biomed. Opt. 15(3), 036002 (1 May 2010) doi:10.1117/1.3427146
TOPICS: Liver, Second-harmonic generation, Collagen, Tissues, Multiphoton microscopy, Objectives, Physics, In vivo imaging, Imaging systems, Microscopy
Chen Xu, Quing Zhu
J. Biomed. Opt. 15(3), 036003 (1 May 2010) doi:10.1117/1.3431086
TOPICS: Photons, Absorption, Optical tomography, Target detection, Breast, Sensors, Ultrasonography, Optical properties, Monte Carlo methods, Cancer
Nina Reitan, Marte Thuen, Pål Erik Goa, Catharina de Lange Davies
J. Biomed. Opt. 15(3), 036004 (1 May 2010) doi:10.1117/1.3431095
TOPICS: Tumors, Tissues, Magnetic resonance imaging, Blood vessels, Fractal analysis, Luminescence, Plasma, Confocal microscopy, Signal detection, Blood
J. Biomed. Opt. 15(3), 036005 (1 May 2010) doi:10.1117/1.3432718
TOPICS: Second-harmonic generation, Cornea, Collagen, Wound healing, Multiphoton microscopy, Physics, Ophthalmology, Signal detection, Medicine, Image processing
J. Biomed. Opt. 15(3), 036006 (1 May 2010) doi:10.1117/1.3431101
TOPICS: Image segmentation, Lung, X-ray computed tomography, Heart, Bone, Data modeling, Tissues, Luminescence, Fluorescence tomography, Tomography
Zheng Miao, Gang Ren, Hongguang Liu, Lei Jiang, Zhen Cheng
J. Biomed. Opt. 15(3), 036007 (1 May 2010) doi:10.1117/1.3432738
TOPICS: Tumors, Optical imaging, Molecules, Luminescence, Proteins, In vivo imaging, Tissues, Receptors, Cancer, Near infrared
Bilal Khan, Fenghua Tian, Khosrow Behbehani, Mario Romero-Ortega, Mauricio Delgado, Nancy Clegg, Linsley Smith, Dahlia Reid, Hanli Liu, George Alexandrakis
J. Biomed. Opt. 15(3), 036008 (1 May 2010) doi:10.1117/1.3432746
TOPICS: Control systems, Electronic filtering, Digital filtering, Image processing, Hemodynamics, Sensors, Near infrared spectroscopy, Brain, Electromyography, Functional magnetic resonance imaging
Björn Kemper, Andreas Bauwens, Angelika Vollmer, Steffi Ketelhut, Patrik Langehanenberg, Johannes Muthing, Helge Karch, Gert von Bally
J. Biomed. Opt. 15(3), 036009 (1 May 2010) doi:10.1117/1.3431712
TOPICS: Phase contrast, Digital holography, Holography, Microscopy, Optical signal processing, Live cell imaging, Analytical research, Biomedical optics, Photonics, Digital imaging
He Xu, Shoko Nioka, Jerry Glickson, Britton Chance, Lin Li
J. Biomed. Opt. 15(3), 036010 (1 May 2010) doi:10.1117/1.3431714
TOPICS: Tumors, Breast cancer, Breast, Tissues, Melanoma, Cancer, Luminescence, Mammography, Oxygen, In vivo imaging
Usama Mahmood, Albert Cerussi, Reza Dehdari, Quoc Nguyen, Timothy Kelley, Bruce Tromberg, Brian Wong
J. Biomed. Opt. 15(3), 036011 (1 May 2010) doi:10.1117/1.3431718
TOPICS: Near infrared, Computed tomography, Imaging systems, New and emerging technologies, Light sources, Diagnostics, Tissues, Head, Surgery, Light emitting diodes
J. Biomed. Opt. 15(3), 036012 (1 May 2010) doi:10.1117/1.3432750
TOPICS: Skin, Ultrasonography, Tissues, Signal attenuation, Optical coherence tomography, Tissue optics, Optical clearing, In vitro testing, Reflectivity, Refractive index
J. Biomed. Opt. 15(3), 036013 (1 May 2010) doi:10.1117/1.3431728
TOPICS: Optical properties, Modulation, Reflectivity, Scattering, Absorption, Optical spheres, Photons, Diffusion, Tissue optics, Optical imaging
J. Biomed. Opt. 15(3), 036014 (1 May 2010) doi:10.1117/1.3442730
TOPICS: Polarization, Tissues, Monte Carlo methods, Anisotropy, Optical fibers, Photons, Heart, Optical imaging, Optical sensing, Natural surfaces
Sabine Klein, Svea Petersen, Ulrike Taylor, Detlef Rath, Stephan Barcikowski
J. Biomed. Opt. 15(3), 036015 (1 May 2010) doi:10.1117/1.3461170
TOPICS: Particles, Nanoparticles, Gold, Visualization, Confocal microscopy, Luminescence, Scattering, Laser scattering, Light scattering, Signal detection
Sven Meissner, Arata Tabuchi, Michael Mertens, Wolfgang Kuebler, Edmund Koch
J. Biomed. Opt. 15(3), 036016 (1 May 2010) doi:10.1117/1.3425654
TOPICS: Lung, Optical coherence tomography, 3D acquisition, In vivo imaging, 3D image processing, Tissues, Data acquisition, Injuries, Stereoscopy, Image acquisition
J. Biomed. Opt. 15(3), 036017 (1 May 2010) doi:10.1117/1.3454391
TOPICS: Tissues, Luminescence, Intestine, Multiphoton microscopy, Brain, Zoom lenses, Lung, Natural surfaces, Collagen, Second-harmonic generation
Abdollah Hassanzadeh, Michael Nitsche, Souzan Armstrong, Noushin Nabavi, Rene Harrison, S. Jeffrey Dixon, Uwe Langbein, Silvia Mittler
J. Biomed. Opt. 15(3), 036018 (1 May 2010) doi:10.1117/1.3443796
TOPICS: Waveguides, Luminescence, Microscopy, Silver, Diffusion, Ion exchange, Glasses, Refractive index, Ions, Microscopes
J. Biomed. Opt. 15(3), 036019 (1 May 2010) doi:10.1117/1.3443793
TOPICS: Absorption, Tissue optics, Acquisition tracking and pointing, Bioalcohols, Photoacoustic tomography, Tissues, Signal detection, Transducers, Lithium, Laser tissue interaction
J. Biomed. Opt. 15(3), 036020 (1 May 2010) doi:10.1117/1.3445712
TOPICS: Optical coherence tomography, Skin, Photodynamic therapy, Blood vessels, Fiber optics, Coherence (optics), Tomography, Laser therapeutics, Imaging systems, Tissues
Zachary Smith, Jyh-Chiang Wang, Sally Quataert, Andrew Berger
J. Biomed. Opt. 15(3), 036021 (1 May 2010) doi:10.1117/1.3443794
TOPICS: Raman spectroscopy, Scattering, Raman scattering, Microscopy, Proteins, Flow cytometry, Microscopes, Scatter measurement, Laser scattering, Light scattering
J. Biomed. Opt. 15(3), 036022 (1 May 2010) doi:10.1117/1.3447922
TOPICS: Eye, Artificial intelligence, Wavefront sensors, Motion estimation, Microlens array, Calibration, Signal to noise ratio, Microlens, Wavefronts, Sensors
Stefan Schlosser, Raphael Wirth, Jan Plock, Alexandre Serov, Andrej Banic, Dominique Erni
J. Biomed. Opt. 15(3), 036023 (1 May 2010) doi:10.1117/1.3449598
TOPICS: Imaging systems, Doppler effect, Ischemia, Blood circulation, Surgery, Data acquisition, Skin, Laser processing, Laser therapeutics, Tissues
Hrebesh Subhash, Viviana Davila, Hai Sun, Anh Nguyen-Huyn, Alfred Nuttall, Ruikang Wang
J. Biomed. Opt. 15(3), 036024 (1 May 2010) doi:10.1117/1.3456554
TOPICS: Optical coherence tomography, In vivo imaging, Imaging systems, 3D image processing, Ear, Visualization, Cameras, Video, Magnetic resonance imaging, Medicine
Dewen Hu, Yucheng Wang, Yadong Liu, Ming Li, Fayi Liu
J. Biomed. Opt. 15(3), 036025 (1 May 2010) doi:10.1117/1.3456371
TOPICS: Veins, Arteries, Image segmentation, Optical imaging, Cerebral cortex, Capillaries, Hemodynamics, Imaging systems, Blood, Cameras
Colin Carpenter, Rebecca Rakow-Penner, Shudong Jiang, Bruce Daniel, Brian Pogue, Gary Glover, Keith Paulsen
J. Biomed. Opt. 15(3), 036026 (1 May 2010) doi:10.1117/1.3430729
TOPICS: Tumors, Tissues, Breast, Oxygen, Modulation, Hemodynamics, Magnetic resonance imaging, Tissue optics, Mammography, Medicine
Hyejun Ra, Emilio Gonzalez-Gonzalez, Bryan Smith, Sanjiv Gambhir, Gordon Kino, Olav Solgaard, Roger Kaspar, Christopher Contag
J. Biomed. Opt. 15(3), 036027 (1 May 2010) doi:10.1117/1.3432627
TOPICS: Skin, Microscopes, Green fluorescent protein, In vivo imaging, Confocal microscopy, 3D image processing, Visualization, Mouse models, Molecular imaging, Luminescence
Research Papers: Sensing
J. Biomed. Opt. 15(3), 037001 (1 May 2010) doi:10.1117/1.3426310
TOPICS: Bone, Raman spectroscopy, Minerals, Collagen, Crystals, Tissue optics, Raman scattering, Scattering, Objectives, Tissues
Gitte Hahn, Karl Christensen, Terence Leung, Gorm Greisen
J. Biomed. Opt. 15(3), 037002 (1 May 2010) doi:10.1117/1.3426323
TOPICS: Near infrared spectroscopy, Statistical analysis, Biological research, Cerebral blood flow, Blood pressure, Signal to noise ratio, Signal detection, Error analysis, Data modeling, Blood circulation
Vishal Saraogi, P. Padmapriya, Apurba Paul, Utpal Tatu, Vasant Natarajan
J. Biomed. Opt. 15(3), 037003 (1 May 2010) doi:10.1117/1.3427142
TOPICS: Blood, Particles, Error analysis, Biomedical optics, Physics, Objectives, Optical tweezers, Microscopes, Mirrors, Biochemistry
Turgut Durduran, Chao Zhou, Erin Buckley, Meeri Kim, Guoqiang Yu, Regine Choe, J. William Gaynor, Thomas Spray, Suzanne Durning, Stefanie Mason, Lisa Montenegro, Susan Nicolson, Robert Zimmerman, Mary Putt, Jiongjiong Wang, Joel Greenberg, John Detre, Arjun Yodh, Daniel Licht
J. Biomed. Opt. 15(3), 037004 (1 May 2010) doi:10.1117/1.3425884
TOPICS: Near infrared spectroscopy, Oxygen, Hemodynamics, Magnetic resonance imaging, Mode conditioning cables, Carbon monoxide, Optical testing, Heart, Blood, Cerebral blood flow
Dorota Szczesna, David Alonso-Caneiro, D. Robert Iskander, Scott Read, Michael Collins
J. Biomed. Opt. 15(3), 037005 (1 May 2010) doi:10.1117/1.3431103
TOPICS: RGB color model, Monochromatic aberrations, Interferometry, Wavefront sensors, Eye, Wavefront aberrations, Zernike polynomials, Algorithm development, Statistical analysis, Biological research
Gerard Remijn, Haruyuki Kojima
J. Biomed. Opt. 15(3), 037006 (1 May 2010) doi:10.1117/1.3431104
TOPICS: Near infrared spectroscopy, Hemodynamics, Brain, Visualization, Psychology, Auditory cortex, Modulation, Head, Photodetectors, Electrodes
Joseph Chaiken, Jerry Goodisman
J. Biomed. Opt. 15(3), 037007 (1 May 2010) doi:10.1117/1.3431119
TOPICS: Skin, Scattering, Light scattering, Tissues, Blood, Laser scattering, Raman scattering, Sensors, In vivo imaging, Modulation
Udi Zelig, Ziv Dror, Svetlana Iskovich, Amir Zwielly, Miri Ben-Harush, Ilana Nathan, Shaul Mordechai, Joseph Kapelushnik
J. Biomed. Opt. 15(3), 037008 (1 May 2010) doi:10.1117/1.3442728
TOPICS: Stem cells, FT-IR spectroscopy, Biological research, Bone, Absorbance, Analytical research, Statistical analysis, Medical research, Spectroscopy, Principal component analysis
J. Biomed. Opt. 15(3), 037009 (1 May 2010) doi:10.1117/1.3442505
TOPICS: Tissues, Diffuse reflectance spectroscopy, Luminescence, In vivo imaging, Tissue optics, Heart, Inflammation, Statistical analysis, Optical spectroscopy, Fluorescence spectroscopy
J. Biomed. Opt. 15(3), 037010 (1 May 2010) doi:10.1117/1.3365952
TOPICS: Hemodynamics, Electroencephalography, Brain, Near infrared spectroscopy, Phase shifts, Sensors, Optical fibers, Electrodes, Bandpass filters, Neuroimaging
Jingjing Liu, Zhengbin Xu, Qinghai Song, Raymond Konger, Young Kim
J. Biomed. Opt. 15(3), 037011 (1 May 2010) doi:10.1117/1.3443795
TOPICS: Backscatter, Skin, Scattering, Microlens array, Optical properties, Skin cancer, Cancer, Animal model studies, Tissues, Spatial coherence
J. Biomed. Opt. 15(3), 037012 (1 May 2010) doi:10.1117/1.3447923
TOPICS: Birefringence, Glucose, Eye, Eye models, Cornea, Polarization, Polarimetry, Refractive index, Sensors, In vivo imaging
J. Biomed. Opt. 15(3), 037013 (1 May 2010) doi:10.1117/1.3449577
TOPICS: Luminescence, Fluorescence anisotropy, Mode conditioning cables, Molecules, Diffusion, In vitro testing, Anisotropy, Lithium, Statistical analysis, Time resolved spectroscopy
J. Biomed. Opt. 15(3), 037014 (1 May 2010) doi:10.1117/1.3449579
TOPICS: Near infrared spectroscopy, Brain, Monte Carlo methods, Cerebral blood flow, Tissue optics, Computed tomography, Error analysis, Contamination, Traumatic brain injury, Skull
J. Biomed. Opt. 15(3), 037015 (1 May 2010) doi:10.1117/1.3454392
TOPICS: Absorption, Tissues, Scattering, Optical fibers, Biological research, Scattering media, Water, Statistical analysis, Optical properties, Particles
J. Biomed. Opt. 15(3), 037016 (1 May 2010) doi:10.1117/1.3456370
TOPICS: Raman spectroscopy, Optical properties, Monte Carlo methods, Raman scattering, Reflectivity, Diffuse reflectance spectroscopy, Optical fibers, Tissues, Scattering, Tissue optics
Zhiwei Huang, Mads Sylvest Bergholt, Wei Zheng, Kan Lin, Khek-Yu Ho, Ming The, Khay-Guan Yeoh
J. Biomed. Opt. 15(3), 037017 (1 May 2010) doi:10.1117/1.3420115
TOPICS: Raman spectroscopy, Tissues, In vivo imaging, Endoscopy, Diagnostics, Laser tissue interaction, Proteins, Cancer, Signal detection, Imaging systems
Research Papers: Therapeutic
J. Biomed. Opt. 15(3), 038001 (1 May 2010) doi:10.1117/1.3431108
TOPICS: Laser welding, Modulation, Laser tissue interaction, Continuous wave operation, Semiconductor lasers, Modes of laser operation, Fiber lasers, Collagen, YAG lasers
Doris Helbig, Anne Moebius, Jan Simon, Uwe Paasch
J. Biomed. Opt. 15(3), 038002 (1 May 2010) doi:10.1117/1.3449736
TOPICS: Skin, Light emitting diodes, Laser therapeutics, Proteins, Collagen, Light-emitting diode therapy, Instrument modeling, Wound healing, Animal model studies, Gas lasers
Valeria Nuzzo, Michèle Savoldelli, Jean-Marc Legeais, Karsten Plamann
J. Biomed. Opt. 15(3), 038003 (1 May 2010) doi:10.1117/1.3455507
TOPICS: Monochromatic aberrations, Cornea, Laser tissue interaction, Femtosecond phenomena, Tissue optics, Laser cutting, Tissues, Sodium, Surgery, Medium wave
Errata
Nikolaos Deliolanis, Joshua Dunham, Thomas Wurdinger, Jose-Luiz Figueiredo, Bakhos Tannous, Vasilis Ntziachristos
J. Biomed. Opt. 15(3), 039801 (1 May 2010) doi:10.1117/1.3449540
TOPICS: In vivo imaging, Tumors, Luminescence, Fluorescence tomography, Tomography, Molecular imaging, Medical research, Medical imaging
Meredith Akins, Mala Mahendroo, Katherine Luby-Phelps
J. Biomed. Opt. 15(3), 039802 (1 May 2010) doi:10.1117/1.3459021
TOPICS: Harmonic generation, Cell biology
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