journal of biomedical optics
VOL. 19 · NO. 8 | August 2014
CONTENTS
JBO Letters
J. Biomed. Opt. 19(8), 080501 (11 August 2014) https://doi.org/10.1117/1.JBO.19.8.080501
TOPICS: Terahertz radiation, Endoscopy, Tissues, Waveguides, Reflectivity, Prototyping, Imaging systems, Image transmission, Polarization, Signal detection
J. Biomed. Opt. 19(8), 080502 (22 August 2014) https://doi.org/10.1117/1.JBO.19.8.080502
TOPICS: Temperature metrology, Tissues, Brain, Luminescence, Liquids, Nitrogen, Natural surfaces, Biomedical optics, Tissue optics, Biological research
Hussain Fatakdawala, Leigh Griffiths, Sterling Humphrey, Laura Marcu
J. Biomed. Opt. 19(8), 080503 (22 August 2014) https://doi.org/10.1117/1.JBO.19.8.080503
TOPICS: Tissues, Collagen, Backscatter, Luminescence, Nondestructive evaluation, Time resolved spectroscopy, Ultrasonography, In vivo imaging, Visualization, Microscopy
Outlooks
J. Biomed. Opt. 19(8), 080701 (12 August 2014) https://doi.org/10.1117/1.JBO.19.8.080701
TOPICS: Imaging systems, In vivo imaging, Tissue optics, Heart, Optogenetics, Sensors, GRIN lenses, Absorption, Scattering, Calcium
Review Papers
Bhanu Neupane, Frances Ligler, Gufeng Wang
J. Biomed. Opt. 19(8), 080901 (14 August 2014) https://doi.org/10.1117/1.JBO.19.8.080901
TOPICS: Stimulated emission depletion microscopy, Microscopy, Proteins, Microscopes, Image resolution, Luminescence, Confocal microscopy, Spatial resolution, Spine, Super resolution
Gerd Keiser, Fei Xiong, Ying Cui, Perry Ping Shum
J. Biomed. Opt. 19(8), 080902 (28 August 2014) https://doi.org/10.1117/1.JBO.19.8.080902
TOPICS: Optical fibers, Tissue optics, Biomedical optics, Cladding, Single mode fibers, Refractive index, Medical research, Sensors, Signal attenuation, Fiber Bragg gratings
Research Papers: General
J. Biomed. Opt. 19(8), 085001 (1 August 2014) https://doi.org/10.1117/1.JBO.19.8.085001
TOPICS: Signal attenuation, Scattering, Ultrasonics, Photoacoustic spectroscopy, Absorption, Tissue optics, Luminescence, Laser scattering, Signal detection, Rhodamine B
Yichao Wu, Iris Kulbatski, Philip Medeiros, Azusa Maeda, Jiachuan Bu, Lizhen Xu, Yonghong Chen, Ralph DaCosta
J. Biomed. Opt. 19(8), 085002 (4 August 2014) https://doi.org/10.1117/1.JBO.19.8.085002
TOPICS: Bacteria, Wound healing, Atrial fibrillation, Imaging devices, Skin, Pathogens, In vivo imaging, Prototyping, Auto-fluorescence imaging, Visualization
J. Biomed. Opt. 19(8), 085003 (5 August 2014) https://doi.org/10.1117/1.JBO.19.8.085003
TOPICS: Point spread functions, Optical coherence tomography, Light sources, Satellites, Quantum wells, Skin, Refractive index, Superluminescent diodes, Statistical modeling, Interfaces
Alexander Moskalensky, Dmitry Strokotov, Andrei Chernyshev, Valeri Maltsev, Maxim Yurkin
J. Biomed. Opt. 19(8), 085004 (7 August 2014) https://doi.org/10.1117/1.JBO.19.8.085004
TOPICS: Particles, Scattering, Light scattering, Blood, Optical spheres, Multiple scattering, Refractive index, Visualization, Atmospheric particles, Spherical lenses
Yuan Liu, Jameel Feshitan, Ming-Yuan Wei, Mark Borden, Baohong Yuan
J. Biomed. Opt. 19(8), 085005 (7 August 2014) https://doi.org/10.1117/1.JBO.19.8.085005
TOPICS: Ultrasonography, Luminescence, Modulation, Signal detection, Imaging systems, Cameras, Ultrasonics, Picosecond phenomena, Optical filters, Transducers
J. Biomed. Opt. 19(8), 085006 (12 August 2014) https://doi.org/10.1117/1.JBO.19.8.085006
TOPICS: Monte Carlo methods, Luminescence, Axicons, Tissues, Tissue optics, Lenses, Natural surfaces, Absorption, Optical properties, Computer simulations
Tobias Kiesslich, Linda Helander, Romana Illig, Christian Oberdanner, Andrej Wagner, Herbert Lettner, Martin Jakab, Kristjan Plaetzer
J. Biomed. Opt. 19(8), 085007 (12 August 2014) https://doi.org/10.1117/1.JBO.19.8.085007
TOPICS: Luminescence, Green fluorescent protein, Picosecond phenomena, In vitro testing, Photodynamic therapy, Tumors, Biological research, Cancer, Physics, Tissues
J. Biomed. Opt. 19(8), 085008 (27 August 2014) https://doi.org/10.1117/1.JBO.19.8.085008
TOPICS: Fluorescence resonance energy transfer, Luminescence, Molecules, Computed tomography, Resonance energy transfer, Optical filters, Bandpass filters, Quantum efficiency, Pulsed laser operation, Mass attenuation coefficient
Tarek Al-Saeed, El-Sayed El-Zaiat
J. Biomed. Opt. 19(8), 085009 (1 August 2014) https://doi.org/10.1117/1.JBO.19.8.085009
Research Papers: Imaging
J. Biomed. Opt. 19(8), 086001 (4 August 2014) https://doi.org/10.1117/1.JBO.19.8.086001
TOPICS: Scattering, Laser speckle contrast imaging, Monte Carlo methods, Multiple scattering, Laser scattering, Tissues, Photon transport, Natural surfaces, Signal detection, Speckle
J. Biomed. Opt. 19(8), 086002 (6 August 2014) https://doi.org/10.1117/1.JBO.19.8.086002
TOPICS: Tissues, Optical coherence tomography, Optical clearing, Temperature metrology, Natural surfaces, Electrodes, Electronic filtering, Image filtering, Resistance, Breast
J. Biomed. Opt. 19(8), 086003 (6 August 2014) https://doi.org/10.1117/1.JBO.19.8.086003
TOPICS: Colon, Luminescence, Colorectal cancer, Quantum dots, In vivo imaging, Tissues, Tumors, Bragg cells, Receptors, Imaging systems
Laura Higgins, Mark Pierce
J. Biomed. Opt. 19(8), 086004 (7 August 2014) https://doi.org/10.1117/1.JBO.19.8.086004
TOPICS: Optical coherence tomography, Image resolution, Imaging systems, Tissues, Tissue optics, Multimodal imaging, Imaging devices, Modulation transfer functions, Distortion, Spatial resolution
Chun-Rui Hu, Delong Zhang, Mikhail Slipchenko, Ji-Xin Cheng, Bing Hu
J. Biomed. Opt. 19(8), 086005 (7 August 2014) https://doi.org/10.1117/1.JBO.19.8.086005
TOPICS: Axons, In vivo imaging, Microscopy, Nerve, Signal processing, Imaging systems, Image segmentation, Real time imaging, Raman scattering, Visualization
J. Biomed. Opt. 19(8), 086006 (7 August 2014) https://doi.org/10.1117/1.JBO.19.8.086006
TOPICS: Super resolution microscopy, Nonlinear optics, Photoacoustic spectroscopy, Gold, Absorption, Nanoparticles, Video, Melanoma, Glasses, Thermography
J. Biomed. Opt. 19(8), 086007 (7 August 2014) https://doi.org/10.1117/1.JBO.19.8.086007
TOPICS: Optical fibers, Acoustics, Transducers, Ultrasonography, Ultrasonics, Data acquisition, Photoacoustic tomography, Biomedical optics, Acquisition tracking and pointing, Signal attenuation
Daniel Salo, Hairong Zhang, David Kim, Mikhail Berezin
J. Biomed. Opt. 19(8), 086008 (7 August 2014) https://doi.org/10.1117/1.JBO.19.8.086008
TOPICS: Tissue optics, Tissues, Photons, Sensors, Near infrared, Scattering, Absorption, Silicon, Indium gallium arsenide, Light scattering
Zhibin Wang, Dan Wei, Ling Wei, Yi He, Guohua Shi, Xunbin Wei, Yudong Zhang
J. Biomed. Opt. 19(8), 086009 (12 August 2014) https://doi.org/10.1117/1.JBO.19.8.086009
TOPICS: Adaptive optics, Aberration correction, In vivo imaging, Bone, Luminescence, Confocal microscopy, Microscopes, Sensors, Wavefronts, Microscopy
J. Biomed. Opt. 19(8), 086010 (14 August 2014) https://doi.org/10.1117/1.JBO.19.8.086010
TOPICS: Neuroimaging, Brain, Imaging systems, Sensors, Tissue optics, Biomedical optics, In vivo imaging, Transmittance, Absorption, Solids
J. Biomed. Opt. 19(8), 086011 (13 August 2014) https://doi.org/10.1117/1.JBO.19.8.086011
TOPICS: Short wave infrared radiation, Scattering, Absorption, Tissue optics, Optical properties, In vivo imaging, Tissues, Multispectral imaging, Infrared imaging, Infrared radiation
J. Biomed. Opt. 19(8), 086012 (14 August 2014) https://doi.org/10.1117/1.JBO.19.8.086012
TOPICS: Absorption, Brain, Neuroimaging, Imaging systems, Optical properties, Sensors, Data analysis, Liquids, Biomedical optics, Spatial resolution
Taiichiro Ida, Yasushi Kawaguchi, Satoko Kawauchi, Keiichi Iwaya, Hitoshi Tsuda, Daizoh Saitoh, Shunichi Sato, Toshiaki Iwai
J. Biomed. Opt. 19(8), 086013 (15 August 2014) https://doi.org/10.1117/1.JBO.19.8.086013
TOPICS: Imaging systems, Tissues, Skin, Blood vessels, Photoacoustic imaging, Sensors, Absorption, Injuries, Signal detection, Fiber lasers
Karissa Tilbury, James Hocker, Bruce Wen, Nathan Sandbo, Vikas Singh, Paul Campagnola
J. Biomed. Opt. 19(8), 086014 (18 August 2014) https://doi.org/10.1117/1.JBO.19.8.086014
TOPICS: Collagen, Tissues, Second-harmonic generation, Lung, Principal component analysis, Microscopy, Harmonic generation, Statistical analysis, Biological research, Optical fibers
Kyle Cheng, Adrian Mariampillai, Kenneth Lee, Barry Vuong, Timothy Luk, Joel Ramjist, M. Anne Curtis, Henry Jakubovic, Peter Kertes, Michelle Letarte, Marie Faughnan, Victor Yang
J. Biomed. Opt. 19(8), 086015 (20 August 2014) https://doi.org/10.1117/1.JBO.19.8.086015
TOPICS: Optical coherence tomography, Skin, Speckle, Tissues, In vivo imaging, Angiography, Brain, Blood vessels, Image processing, Tissue optics
Krystyna Drozdowicz-Tomsia, Ayad Anwer, Michael Cahill, Kaiser Madlum, Amel Maki, Mark Baker, Ewa Goldys
J. Biomed. Opt. 19(8), 086016 (20 August 2014) https://doi.org/10.1117/1.JBO.19.8.086016
TOPICS: Fluorescence lifetime imaging, Luminescence, Multiphoton fluorescence microscopy, Microscopy, Multiphoton microscopy, Mode conditioning cables, Glucose, Tissues, Cancer, Molecules
J. Biomed. Opt. 19(8), 086017 (21 August 2014) https://doi.org/10.1117/1.JBO.19.8.086017
TOPICS: Blood, Photoacoustic microscopy, Diagnostics, Oxygen, Blood circulation, Tissues, Blood vessels, Acoustics, Transducers, Skin
Junjie Yao, Daria Shcherbakova, Chiye Li, Arie Krumholz, Ramon Lorca, Erin Reinl, Sarah England, Vladislav Verkhusha, Lihong Wang
J. Biomed. Opt. 19(8), 086018 (21 August 2014) https://doi.org/10.1117/1.JBO.19.8.086018
TOPICS: Luminescence, Confocal microscopy, Switching, Microscopy, Resolution enhancement technologies, Image resolution, Image enhancement, Live cell imaging, Spatial resolution, Microscopes
Amaan Mazhar, Steve Saggese, Alonda Pollins, Nancy Cardwell, Lillian Nanney, David Cuccia
J. Biomed. Opt. 19(8), 086019 (22 August 2014) https://doi.org/10.1117/1.JBO.19.8.086019
TOPICS: Scattering, Tissues, Injuries, Absorption, Tissue optics, Collagen, Reflectivity, Optical properties, Imaging systems, Near infrared
Xin Yin, Jennifer Chao, Ruikang Wang
J. Biomed. Opt. 19(8), 086020 (22 August 2014) https://doi.org/10.1117/1.JBO.19.8.086020
TOPICS: Image segmentation, Optical coherence tomography, 3D image processing, Retina, Eye, Detection and tracking algorithms, Algorithm development, Image processing algorithms and systems, Chaos, Tissues
Sarah Saint-Jalm, Esben Andresen, Patrick Ferrand, Abdelkrim Bendahmane, Arnaud Mussot, Olivier Vanvincq, Géraud Bouwmans, Alexandre Kudlinski, Hervé Rigneault
J. Biomed. Opt. 19(8), 086021 (26 August 2014) https://doi.org/10.1117/1.JBO.19.8.086021
TOPICS: Solitons, Microscopy, Second-harmonic generation, Dispersion, Ultrafast phenomena, Imaging spectroscopy, Nonlinear optics, Luminescence, Optical filters, Femtosecond phenomena
Paritosh Pande, Sebina Shrestha, Jesung Park, Michael Serafino, Irma Gimenez-Conti, Jimi Brandon, Yi-Shing Cheng, Brian Applegate, Javier Jo
J. Biomed. Opt. 19(8), 086022 (27 August 2014) https://doi.org/10.1117/1.JBO.19.8.086022
TOPICS: Optical coherence tomography, Tissues, Image classification, Image segmentation, Cancer, Feature selection, Image processing, Image analysis, Tumor growth modeling, Imaging systems
Travis Omer, Lingling Zhao, Xavier Intes, Juergen Hahn
J. Biomed. Opt. 19(8), 086023 (28 August 2014) https://doi.org/10.1117/1.JBO.19.8.086023
TOPICS: Luminescence, Fluorescence resonance energy transfer, In vivo imaging, Data modeling, Picosecond phenomena, In vitro testing, Error analysis, Resonance energy transfer, Imaging systems, Fluorescence lifetime imaging
Research Papers: Sensing
Rubina Shaikh, Tapas Kumar Dora, Supriya Chopra, Amita Maheshwari, Deodhar Kedar, Rekhi Bharat, C. Murali Krishna
J. Biomed. Opt. 19(8), 087001 (7 August 2014) https://doi.org/10.1117/1.JBO.19.8.087001
TOPICS: Cervix, Vagina, Tumors, Raman spectroscopy, Cervical cancer, In vivo imaging, Proteins, Cancer, Spectroscopy, Data modeling
Sunita Ahlawat, Aniket Chowdhury, Nitin Kumar, Abha Uppal, Ravi Shanker Verma, Pradeep Kumar Gupta
J. Biomed. Opt. 19(8), 087002 (14 August 2014) https://doi.org/10.1117/1.JBO.19.8.087002
TOPICS: Raman spectroscopy, Polarization, Molecules, Spectroscopy, Blood, Light scattering, Oxygen, Optical tweezers, Proteins, Spatial light modulators
J. Biomed. Opt. 19(8), 087003 (19 August 2014) https://doi.org/10.1117/1.JBO.19.8.087003
TOPICS: Colorectal cancer, Surface enhanced Raman spectroscopy, Proteins, Cancer, Diagnostics, Silver, Principal component analysis, Raman spectroscopy, Blood, Nanoparticles
Xiaoli Long, Guisong Liu, Tao Pan, Jiemei Chen
J. Biomed. Opt. 19(8), 087004 (19 August 2014) https://doi.org/10.1117/1.JBO.19.8.087004
TOPICS: Calibration, Statistical modeling, Blood, Spectroscopy, FT-IR spectroscopy, Process modeling, Absorption, Quantitative analysis, Molecules, Spectrometers
Vidita Urboniene, Milda Pucetaite, Feliksas Jankevicius, Arunas Zelvys, Valdas Sablinskas, Gerald Steiner
J. Biomed. Opt. 19(8), 087005 (20 August 2014) https://doi.org/10.1117/1.JBO.19.8.087005
TOPICS: Tumors, Tissues, FT-IR spectroscopy, Tissue optics, Kidney, Spectroscopy, Absorbance, Infrared spectroscopy, Imaging spectroscopy, Principal component analysis
John Weidling, Sara Sameni, Jonathan Lakey, Elliot Botvinick
J. Biomed. Opt. 19(8), 087006 (27 August 2014) https://doi.org/10.1117/1.JBO.19.8.087006
TOPICS: Oxygen, Tissues, In vivo imaging, Mercury, Light emitting diodes, Measurement devices, In vitro testing, Skin, Sensors, Hypoxia
Meha Qassem, Panayiotis Kyriacou
J. Biomed. Opt. 19(8), 087007 (28 August 2014) https://doi.org/10.1117/1.JBO.19.8.087007
TOPICS: Skin, Near infrared spectroscopy, Control systems, Reflectivity, Absorption, Tissue optics, Principal component analysis, Fiber optics, In vivo imaging, Spectrophotometry
Research Papers: Therapeutic
Samuel Arba Mosquera, Shwetabh Verma
J. Biomed. Opt. 19(8), 088001 (6 August 2014) https://doi.org/10.1117/1.JBO.19.8.088001
TOPICS: Laser ablation, Monochromatic aberrations, Refraction, Surgery, Tissue optics, Tissues, Visualization, Detection and tracking algorithms, Visual optics, Eye
Linda Helander, Hans Krokan, Anders Johnsson, Odrun Gederaas, Kristjan Plaetzer
J. Biomed. Opt. 19(8), 088002 (8 August 2014) https://doi.org/10.1117/1.JBO.19.8.088002
TOPICS: Photodynamic therapy, Cell death, Cancer, Luminescence, Light emitting diodes, Absorption, Light sources, In vitro testing, Light, Picosecond phenomena
Flávio Domingues das Neves, Thiago de Almeida Prado Naves Carneiro, Celio Jesus do Prado, Marcel Santana Prudente, Karla Zancopé, Letícia Resende Davi, Gustavo Mendonca, Carlos José Soares
J. Biomed. Opt. 19(8), 088003 (11 August 2014) https://doi.org/10.1117/1.JBO.19.8.088003
TOPICS: Teeth, Computing systems, Optical scanning, Optics manufacturing, Mouth, Computer aided design, Design for manufacturability, Ceramics, Statistical analysis, Atmospheric modeling
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