journal of biomedical optics
VOL. 20 · NO. 11 | November 2015
CONTENTS
JBO Letters
Xuesong Li, Wen Jiun Lam, Zhe Cao, Yan Hao, Qiqi Sun, Sicong He, Ho Yi Mak, Jianan Qu
J. Biomed. Opt. 20(11), 110501 (18 November 2015) doi:10.1117/1.JBO.20.11.110501
TOPICS: Green fluorescent protein, Imaging systems, Proteins, Nonlinear optics, Luminescence, Microscopes, Raman scattering, Picosecond phenomena, Femtosecond phenomena, Electronic filtering
J. Biomed. Opt. 20(11), 110502 (18 November 2015) doi:10.1117/1.JBO.20.11.110502
TOPICS: Fourier transforms, Reflectivity, Luminescence, Optical properties, Optical spectroscopy imaging, Picosecond phenomena, Solids, Sensors, Biological research, Light scattering
J. Biomed. Opt. 20(11), 110503 (18 November 2015) doi:10.1117/1.JBO.20.11.110503
TOPICS: Nerve, Tissues, Multispectral imaging, Imaging systems, Photoacoustic imaging, Ultrasonography, Absorption, Tissue optics, Photoacoustic spectroscopy, Optical parametric oscillators
Qingli Li, Hui Peng, Jing Wang, Yiting Wang, Fangmin Guo
J. Biomed. Opt. 20(11), 110504 (20 November 2015) doi:10.1117/1.JBO.20.11.110504
TOPICS: Hyperspectral imaging, Luminescence, Quantum dots, Microscopy, Imaging systems, 3D image processing, Image visualization, Visualization, Spectral resolution, Colorectal cancer
Asael Papour, Zachary Taylor, Oscar Stafsudd, Irena Tsui, Warren Grundfest
J. Biomed. Opt. 20(11), 110505 (23 November 2015) doi:10.1117/1.JBO.20.11.110505
TOPICS: Light emitting diodes, Retina, In vivo imaging, Luminescence, Cameras, Eye, Imaging systems, Fluorescence lifetime imaging, Tissue optics, Microscopy
Laura Higgins, Margot Zevon, Vidya Ganapathy, Yang Sheng, Mei Chee Tan, Richard Riman, Charles Roth, Prabhas Moghe, Mark Pierce
J. Biomed. Opt. 20(11), 110506 (25 November 2015) doi:10.1117/1.JBO.20.11.110506
TOPICS: Confocal microscopy, Upconversion, Microscopes, Objectives, Tissues, Erbium, Nanoparticles, Nanocomposites, Tissue optics, Microscopy
Special Section on Quantitative Phase Imaging in Biomedicine
J. Biomed. Opt. 20(11), 111201 (9 December 2015) doi:10.1117/1.JBO.20.11.111201
TOPICS: Phase imaging, Tissue optics, Biomedical optics, Tissues, Light scattering, Spectroscopy, Imaging spectroscopy, Physics, Pathophysiology, Fourier transforms
Morteza Khaleghi, Jérémie Guignard, Cosme Furlong, John Rosowski
J. Biomed. Opt. 20(11), 111202 (18 May 2015) doi:10.1117/1.JBO.20.11.111202
TOPICS: Holograms, Multiplexing, Holography, 3D image reconstruction, Motion measurement, 3D metrology, Vibrometry, Image registration, Fourier transforms, 3D image processing
J. Biomed. Opt. 20(11), 111203 (3 July 2015) doi:10.1117/1.JBO.20.11.111203
TOPICS: Confocal microscopy, Adaptive optics, Imaging systems, Digital holography, Optical signal processing, Image restoration, Holograms, Digital imaging, Eye, Stars
J. Biomed. Opt. 20(11), 111204 (6 July 2015) doi:10.1117/1.JBO.20.11.111204
TOPICS: Holograms, Digital holography, Microscopy, Luminescence, Holography, Adaptive optics, 3D image reconstruction, Mirrors, Optical signal processing, Wavefronts
J. Biomed. Opt. 20(11), 111205 (17 July 2015) doi:10.1117/1.JBO.20.11.111205
TOPICS: Blood, Scattering, Phase imaging, Refractive index, Biomedical optics, Microfluidics, Cameras, Light scattering, Microscopes, Imaging systems
Vera Kollarova, Jana Collakova, Zbynek Dostal, Pavel Vesely, Radim Chmelik
J. Biomed. Opt. 20(11), 111206 (5 August 2015) doi:10.1117/1.JBO.20.11.111206
TOPICS: Diffusers, Scattering media, Phase imaging, Scattering, Image quality, Light scattering, Spatial coherence, Holography, Microscopes, Objectives
SangYun Lee, Kyoohyun Kim, Yuhyun Lee, Sungjin Park, Heejae Shin, Jongwon Yang, Kwanhong Ko, HyunJoo Park, YongKeun Park
J. Biomed. Opt. 20(11), 111207 (23 July 2015) doi:10.1117/1.JBO.20.11.111207
TOPICS: 3D image processing, Refractive index, Hydrogen, Phase imaging, Mirrors, 3D metrology, Digital image correlation, Beam splitters, Reconstruction algorithms, Interferometry
HyunJoo Park, Taegyu Ahn, Kyoohyun Kim, Sangyun Lee, Song-yi Kook, Dongheon Lee, In Bum Suh, Sunghun Na, YongKeun Park
J. Biomed. Opt. 20(11), 111208 (11 August 2015) doi:10.1117/1.JBO.20.11.111208
TOPICS: Blood, Refractive index, Optical testing, Oxygen, Phase measurement, Diffraction, Optical tomography, 3D metrology, Biomedical optics, Fetus
J. Biomed. Opt. 20(11), 111209 (13 August 2015) doi:10.1117/1.JBO.20.11.111209
TOPICS: Microscopy, Diffusion, Biomedical optics, Phase imaging, Luminescence, Fourier transforms, Particles, Phase measurement, Stochastic processes, Microscopes
Hassaan Majeed, Mikhail Kandel, Kevin Han, Zelun Luo, Virgilia Macias, Krishnarao Tangella, Andre Balla, Gabriel Popescu
J. Biomed. Opt. 20(11), 111210 (20 August 2015) doi:10.1117/1.JBO.20.11.111210
TOPICS: Tissues, Breast cancer, Tissue optics, Microscopy, Biopsy, Microscopes, Diagnostics, Tumors, Spatial light modulators, Breast
Diane N. H. Kim, Michael Teitell, Jason Reed, Thomas Zangle
J. Biomed. Opt. 20(11), 111211 (25 August 2015) doi:10.1117/1.JBO.20.11.111211
TOPICS: Image segmentation, Image filtering, Image processing algorithms and systems, Biological research, Phase shift keying, Linear filtering, Optical filters, Gaussian filters, Detection and tracking algorithms, Statistical analysis
Shamira Sridharan, Aron Katz, Felipe Soto-Adames, Gabriel Popescu
J. Biomed. Opt. 20(11), 111212 (3 September 2015) doi:10.1117/1.JBO.20.11.111212
TOPICS: Phase imaging, Microscopy, Microscopes, Organisms, Phase contrast, Tissues, Image resolution, Imaging systems, Transmission electron microscopy, Phase shifts
Jana Collakova, Aneta Krizova, Vera Kollarova, Zbynek Dostal, Michala Slaba, Pavel Vesely, Radim Chmelik
J. Biomed. Opt. 20(11), 111213 (3 September 2015) doi:10.1117/1.JBO.20.11.111213
TOPICS: Cell death, Holography, Cancer, Microscopy, Coherence (optics), Interference filters, Objectives, Sodium, Light scattering, Spatial coherence
Aneta Křížová, Jana Čolláková, Zbynek Dostal, Lukas Kvasnica, Hana Uhlirova, Tomáš Zikmund, Pavel Veselý, Radim Chmelik
J. Biomed. Opt. 20(11), 111214 (3 September 2015) doi:10.1117/1.JBO.20.11.111214
TOPICS: Phase imaging, Visualization, Holography, Phase shifts, Image processing, Image segmentation, Microscopes, Refractive index, Holograms, Microscopy
Zbynek Dostal, Tomas Slaby, Lukas Kvasnica, Martin Lostak, Aneta Krizova, Radim Chmelik
J. Biomed. Opt. 20(11), 111215 (28 October 2015) doi:10.1117/1.JBO.20.11.111215
TOPICS: Holography, Microscopes, Light sources, Objectives, Mirrors, Optical alignment, Alignment procedures, Phase measurement, Holograms, Signal processing
J. Biomed. Opt. 20(11), 111216 (11 September 2015) doi:10.1117/1.JBO.20.11.111216
TOPICS: Tomography, Spatial light modulators, Microscopes, Reconstruction algorithms, Wavefronts, Refractive index, Calibration, Holography, Mirrors, Objectives
J. Biomed. Opt. 20(11), 111217 (6 October 2015) doi:10.1117/1.JBO.20.11.111217
TOPICS: Interferometry, Multiplexing, Cameras, Interferometers, Microscopy, Imaging systems, Retroreflectors, Wavefronts, Microscopes, Digital cameras
J. Biomed. Opt. 20(11), 111218 (21 October 2015) doi:10.1117/1.JBO.20.11.111218
TOPICS: Blood, Digital holography, Chemical analysis, 3D image processing, Microscopy, Holography, Oxygen, 3D image reconstruction, Image segmentation, Image storage
Research Papers: General
Fabrizio Martelli, Samuele Del Bianco, Lorenzo Spinelli, Stefano Cavalieri, Paola Di Ninni, Tiziano Binzoni, Alexander Jelzow, Rainer Macdonald, Heidrun Wabnitz
J. Biomed. Opt. 20(11), 115001 (2 November 2015) doi:10.1117/1.JBO.20.11.115001
TOPICS: Optical properties, Tissues, Absorption, Tissue optics, Picosecond phenomena, Biological research, Data modeling, Reconstruction algorithms, Brain, Scattering
David Halaney, Aydin Zahedivash, Jennifer Phipps, Tianyi Wang, Jordan Dwelle, Claude Jourdan Le Saux, Reto Asmis, Thomas Milner, Marc Feldman
J. Biomed. Opt. 20(11), 115002 (5 November 2015) doi:10.1117/1.JBO.20.11.115002
TOPICS: Light scattering, Scattering, CMOS sensors, Control systems, Polarization, Tissues, NOx, Refractive index, Cancer, In vitro testing
Hyeokjun Byeon, Young-Ran Ha, Sang-Joon Lee
J. Biomed. Opt. 20(11), 115003 (6 November 2015) doi:10.1117/1.JBO.20.11.115003
TOPICS: Holography, Blood, Proteins, Microscopy, Biological research, Diffraction, Holograms, Refractive index, Statistical analysis, Phase imaging
William Smollon, Billy Wooten, Billy Hammond
J. Biomed. Opt. 20(11), 115004 (12 November 2015) doi:10.1117/1.JBO.20.11.115004
TOPICS: Solids, Bone, Photometry, Eye, Visualization, Retina, Modulation, Receptors, Light emitting diodes, Absorbance
Stefan Kalies, Sebastian Keil, Sina Sender, Susanne Hammer, Georgios Antonopoulos, Markus Schomaker, Tammo Ripken, Hugo Murua Escobar, Heiko Meyer, Dag Heinemann
J. Biomed. Opt. 20(11), 115005 (12 November 2015) doi:10.1117/1.JBO.20.11.115005
TOPICS: Nanoparticles, Gold, Proteins, Luminescence, Particles, Molecules, Pulsed laser operation, Laser therapeutics, Laser marking, Molecular lasers
Aditi Sahu, Suyash Dhoot, Amandeep Singh, Sharada Sawant, Nikhila Nandakumar, Sneha Talathi-Desai, Mandavi Garud, Sandeep Pagare, Sanjeeva Srivastava, Sudhir Nair, Pankaj Chaturvedi, C. Murali Krishna
J. Biomed. Opt. 20(11), 115006 (17 November 2015) doi:10.1117/1.JBO.20.11.115006
TOPICS: Cancer, Raman spectroscopy, Control systems, Remote sensing, Spectroscopy, Tumor growth modeling, Statistical modeling, Statistical analysis, Blood, Data modeling
Aslinur Sircan-Kuçuksayan, Tuba Denkceken, Murat Canpolat
J. Biomed. Opt. 20(11), 115007 (23 November 2015) doi:10.1117/1.JBO.20.11.115007
TOPICS: Tissues, Prostate, Singular optics, Tissue optics, Light scattering, Scattering, Photons, Monte Carlo methods, Ocean optics, Reflectance spectroscopy
J. Biomed. Opt. 20(11), 115008 (30 November 2015) doi:10.1117/1.JBO.20.11.115008
TOPICS: Femtosecond phenomena, Microscopes, Green fluorescent protein, Luminescence, Biomedical optics, Stem cells, Near infrared, Objectives, Laser therapeutics, Atomic force microscopy
Research Papers: Imaging
J. Biomed. Opt. 20(11), 116001 (2 November 2015) doi:10.1117/1.JBO.20.11.116001
TOPICS: Luminescence, Microscopy, Tissues, Photons, Video, Absorption, Image quality, Tissue optics, Femtosecond phenomena, Laser tissue interaction
Junhui Shi, Lidai Wang, Cedric Noordam, Lihong Wang
J. Biomed. Opt. 20(11), 116002 (2 November 2015) doi:10.1117/1.JBO.20.11.116002
TOPICS: Pulsed laser operation, Bessel beams, Nonlinear optics, Continuous wave operation, Laser beam diagnostics, Carbon, Photoacoustic microscopy, Image resolution, Axicons, Focus stacking
J. Biomed. Opt. 20(11), 116003 (2 November 2015) doi:10.1117/1.JBO.20.11.116003
TOPICS: Tumors, Thermography, Tissues, Breast cancer, Blood, Light emitting diodes, LED lighting, Mid-IR, In vivo imaging, Mammography
Yuxuan Cheng, Li Guo, Cong Pan, Tongtong Lu, Tianyu Hong, Zhihua Ding, Peng Li
J. Biomed. Opt. 20(11), 116004 (2 November 2015) doi:10.1117/1.JBO.20.11.116004
TOPICS: Optical coherence tomography, Angiography, Statistical analysis, Scattering, Advanced distributed simulations, Mathematical modeling, Motion models, Blood circulation, Tissues, Cadmium
J. Biomed. Opt. 20(11), 116005 (2 November 2015) doi:10.1117/1.JBO.20.11.116005
TOPICS: Spatial frequencies, Reflectivity, Optical properties, Data acquisition, Tissue optics, Demodulation, Cameras, Scattering, Tissues, In vivo imaging
J. Biomed. Opt. 20(11), 116006 (23 November 2015) doi:10.1117/1.JBO.20.11.116006
TOPICS: Scattering, Particles, Spatial frequencies, Reflectivity, Aluminum, Absorption, Optical properties, Tissues, Light scattering, Tissue optics
Hajo Suhr, Alois Herkommer
J. Biomed. Opt. 20(11), 116007 (23 November 2015) doi:10.1117/1.JBO.20.11.116007
TOPICS: Microscopes, Microscopy, Tolerancing, Objectives, Aspheric lenses, Biomedical optics, Sensors, Modulation transfer functions, Imaging systems, Image resolution
Maribel Hidalgo-Aguirre, Julian Gitelman, Mark Lesk, Santiago Costantino
J. Biomed. Opt. 20(11), 116008 (24 November 2015) doi:10.1117/1.JBO.20.11.116008
TOPICS: Image segmentation, Optical coherence tomography, Optic nerve, Head, Tissues, Retina, Algorithm development, Eye, Image processing algorithms and systems, Video
Chaoliang Chen, Weisong Shi, Wanrong Gao
J. Biomed. Opt. 20(11), 116009 (30 November 2015) doi:10.1117/1.JBO.20.11.116009
TOPICS: Blood circulation, Optical coherence tomography, Signal to noise ratio, Blood vessels, In vivo imaging, Phase shifts, Tissues, Image registration, Associative arrays, Coherence imaging
Yue Zhu, Wanrong Gao, Yuan Zhou, Yingcheng Guo, Feng Guo, Yong He
J. Biomed. Opt. 20(11), 116010 (30 November 2015) doi:10.1117/1.JBO.20.11.116010
TOPICS: Liver, Tissues, Veins, Tomography, Optical coherence tomography, Liver cancer, Imaging systems, Biopsy, Charge-coupled devices, Mirrors
Research Papers: Sensing
Jasmine Devadhasan, Hyunhee Oh, Cheol Soo Choi, Sanghyo Kim
J. Biomed. Opt. 20(11), 117001 (2 November 2015) doi:10.1117/1.JBO.20.11.117001
TOPICS: Oxidation, Glucose, Nanoparticles, CMOS sensors, Blood, Positron emission tomography, Sensors, Image sensors, Cameras, Biological research
Daqing Piao, Nigar Sultana, G. Reed Holyoak, Jerry Ritchey, Corey Wall, Jill Murray, Kenneth Bartels
J. Biomed. Opt. 20(11), 117002 (5 November 2015) doi:10.1117/1.JBO.20.11.117002
TOPICS: Liver, Scattering, Absorption, Spectroscopy, In vivo imaging, Tissues, Reflectivity, Optical fibers, Tissue optics, Light scattering
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